Novosphingobium ginsenosidimutans: FRF71_06040
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Entry
FRF71_06040 CDS
T06189
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
ngf
Novosphingobium ginsenosidimutans
Pathway
ngf01501
beta-Lactam resistance
ngf01503
Cationic antimicrobial peptide (CAMP) resistance
ngf02020
Two-component system
ngf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ngf00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FRF71_06040
09132 Signal transduction
02020 Two-component system
FRF71_06040
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FRF71_06040
01503 Cationic antimicrobial peptide (CAMP) resistance
FRF71_06040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ngf02000
]
FRF71_06040
02044 Secretion system [BR:
ngf02044
]
FRF71_06040
01504 Antimicrobial resistance genes [BR:
ngf01504
]
FRF71_06040
Transporters [BR:
ngf02000
]
Other transporters
Pores ion channels [TC:
1
]
FRF71_06040
Secretion system [BR:
ngf02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
FRF71_06040
RTX toxin transporter
FRF71_06040
Multiple protein transporter
FRF71_06040
RaxAB-RaxC type I secretion system protein
FRF71_06040
Antimicrobial resistance genes [BR:
ngf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
FRF71_06040
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
FRF71_06040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Bap31
Motif
Other DBs
NCBI-ProteinID:
QEA15731
UniProt:
A0A5B8S2P7
LinkDB
All DBs
Position
1198711..1200162
Genome browser
AA seq
483 aa
AA seq
DB search
MAIRLGRAILLAGIGLAAAPALADDLREALVMAYNTNPNLQAARAQQRAVDAGVPIARSA
ALPTLSGAAAHTEFVKRSASTPGGPLGGPERATTADLTAGMPLYAGGAIKNSISAAKTRV
EAGRADLRATETEVFAQTVAAYMDVILGQAVVGLNKGQVGVLEVNLQATRDRFEIGDLTR
TDVAQSQARLSLARGQARSAEAQLVAARERYIAVVGKEPVNLQSPPPLSGLPADVETAVQ
VALDSNPDLIAARQRSKAAGFDTAASGAGRLPRVSVFAGADYTDYHGTLGGGSPLVNQSA
TTGQAGIRASIPLFQGGLPAAQRRQAQAREGATLEQEIAIERQVISGVRAAYASWQASRE
IIESSQSAVDAAKLSLEGVKAENTVGNRTILDILNAEQELLNAQVQLVTAQRNSYVAGFN
LLAAMGKAEARDLALDGGALYDPVANYDRISGNIWDWASDPAPKPQSTRTVDTKAQDGTV
TPK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccatacggcttgggcgggcaatcctgctggcgggaatcgggctggcagcagccccg
gcgctcgccgatgatctgcgcgaggcgctggtcatggcttacaataccaacccgaacctg
caggcggcgcgtgcccagcagcgcgccgttgatgccggggtgccgatcgctcgctcagcc
gccctgccgacactcagcggcgccgccgcacacaccgaattcgtcaagcgctcggcctcc
acgcccggcggaccgctcggcgggcccgaacgcgcgaccaccgcagacctgaccgcaggc
atgccgctctatgccggcggcgctatcaagaattcgatcagcgccgccaagacccgcgtc
gaagccggccgcgccgatctccgagcaactgagaccgaagtcttcgctcagaccgttgca
gcctacatggacgtaatcctgggccaggccgtggttggcctcaacaagggccaggtcggc
gtgctcgaagtcaacctgcaagccacacgcgaccggtttgagatcggcgatcttacccgc
accgacgtcgcgcagtcgcaggcccgtctcagcctcgcccgtggccaggcccgctcggcc
gaggcccagctggtggcagcgcgcgagcgctatatcgccgtggtcggcaaagagccggtc
aacctccagtcaccgccgccgctatcggggttacctgccgatgtcgaaaccgccgtccag
gttgcgctcgattcgaacccggacctgatcgccgcgcgtcagcgcagcaaggctgcaggc
ttcgataccgctgcttcaggtgccggacggctgccgcgcgtcagcgtcttcgccggggcg
gactataccgattaccacggcacgctgggcggcggttcgccgctggtcaaccagtcagcg
acaaccggccaggccggcatacgggcctcaatcccgttgttccagggcggccttcctgcc
gcccagcgccggcaggcccaggcccgcgaaggggcgacgctggaacaggaaattgcgatc
gaacgccaggtcatctccggcgtccgtgctgcctatgccagctggcaggccagccgggag
atcatcgaatcttcgcagtccgccgtcgatgctgccaagctcagccttgaaggtgtgaag
gccgagaacacggtcggcaaccgcacgatcctcgatatcctgaatgccgagcaggaactg
ctcaacgcgcaggtccagctcgtcaccgcgcagcgcaattcctacgtcgccgggttcaac
ctcctcgccgcaatgggcaaggccgaggcgcgcgatctggcgcttgacggcggcgcgctc
tacgatccggtcgccaattatgaccgcatctccggcaacatctgggactgggccagcgac
cccgcgcccaagccccagtctacgcgcaccgttgacaccaaggcccaggacgggacagta
acccccaagtga
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integrated database retrieval system
