Nitrosopumilus piranensis: NPIRD3C_0596
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Entry
NPIRD3C_0596 CDS
T03656
Symbol
abfD
Name
(GenBank) 4-hydroxybutyryl-CoA dehydratase
KO
K14534
4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:
4.2.1.120
5.3.3.3
]
Organism
nid
Nitrosopumilus piranensis
Pathway
nid00650
Butanoate metabolism
nid00720
Other carbon fixation pathways
nid01100
Metabolic pathways
nid01120
Microbial metabolism in diverse environments
nid01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
nid00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
NPIRD3C_0596 (abfD)
09102 Energy metabolism
00720 Other carbon fixation pathways
NPIRD3C_0596 (abfD)
Enzymes [BR:
nid01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.120 4-hydroxybutanoyl-CoA dehydratase
NPIRD3C_0596 (abfD)
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.3 vinylacetyl-CoA Delta-isomerase
NPIRD3C_0596 (abfD)
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Gene cluster
GFIT
Motif
Pfam:
HpaB_N
HpaB
Acyl-CoA_dh_M
Herpes_LP
Motif
Other DBs
NCBI-ProteinID:
AJM91810
UniProt:
A0A0C5BXW1
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Position
496989..498515
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AA seq
508 aa
AA seq
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MANVLKTIRTGEDYIESLRGRDLKVYLFGELVKEPVDHPIIRPSINAVAETYDLAVREEA
LASADSSITGLKVNRFLHIAESAEDLVLQNKMQRKLGQNTGTCFQRCVGMDALNSLHSTT
FEIDEKHGTDYHKRFLEFVKMVQKENLVIGGAMTDPKGDRSKGPSEQEDPDLFTRIVDTD
ENGVYVSGAKAHQTGCINSHWIILMPTIRLTEDDKDWAIVGAIPADAKGVTYIYGRQSCD
TRSMEEGDIDDGNAKFGGQEALIILDRVFIPWDKVFMHGEYEFASMLIERFTCYHRRSYV
CKTGLGDVLIGAAATIADYNGVPKVSHIKDKIIEMTHLNETIFAAGIASSHQGQKMKSGV
YLNDDMLAQVCKHNVTRFPYEISRLAQDIAGGLVVTLPSEKDFRHPEAGPLLKKYLAGRK
GTDVENRMRILRLIENMTLGRNAVGYLTESMHGAGSPQAQRIQIQRQMQIGYKKNLAKNL
AGIKNDIVEPSEPSEYFKRVFKTKDSVL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgtcttaaagacgattagaactggtgaagattatattgaaagccttaggggc
agagatcttaaggtttacctttttggagaattagtaaaagaacctgtagatcatccaatt
attagaccatcaattaatgctgttgcagaaacatatgatcttgcagtacgtgaggaagca
ttagcttctgctgattcatcaattacaggactaaaagtaaatcgatttttacatattgca
gagagtgctgaagatttagttttacaaaataaaatgcaacgtaaactaggtcaaaacact
ggtacatgtttccaaagatgtgttggaatggatgcactgaactctttacattcaacaact
tttgaaatcgatgaaaaacatggtacagattaccacaaaagatttttagaatttgtaaag
atggttcaaaaagaaaatcttgtaattggtggtgctatgactgatccaaaaggagataga
agtaaaggaccttctgaacaagaagaccctgatttatttacaagaattgttgatactgat
gaaaacggagtttatgtttctggtgctaaagcacatcaaactggttgcataaactctcac
tggataattttaatgccaactattagattaacagaagatgataaagactgggcaattgta
ggtgcaattcctgcagatgcaaaaggtgttacttacatttacggtagacaatcttgtgat
acacgaagtatggaagaaggtgatattgatgatggtaatgcaaaattcggcggacaagaa
gcactaatcatcttagatagagtgtttattccatgggacaaagtcttcatgcatggtgaa
tatgaatttgcatcaatgcttatagaacgtttcacatgctatcatagacgtagttatgtt
tgtaaaactggactcggtgatgttctaatcggagctgcagcaacaattgcagactataat
ggcgttcctaaagtttctcacattaaagataagattattgagatgactcatcttaatgaa
acaatatttgcagcaggtattgcatcttctcatcaaggtcagaagatgaaatcgggtgta
tatcttaatgatgatatgcttgcacaagtttgtaaacacaatgtcacaagattcccctat
gaaattagcagacttgcacaagacattgcaggtggattggtagttacacttccctctgaa
aaagactttagacatccagaagcaggcccattactaaaaaaatatctcgctggaagaaaa
ggtacagatgttgaaaatagaatgagaattcttagattaattgaaaacatgactttaggt
agaaatgcagttgggtatcttacagaatcaatgcatggtgcaggttctccacaggctcaa
agaattcaaatacaaaggcaaatgcaaattggatacaaaaagaatctggcaaagaattta
gctggaattaaaaatgatattgtagaaccatctgagccatcagaatatttcaaacgagtc
tttaaaacaaaagactctgtactttag
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