Candidatus Nitrosopumilus sp. SW: Nisw_03935
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Entry
Nisw_03935 CDS
T06175
Name
(GenBank) 4-hydroxybutyryl-CoA dehydratase
KO
K14534
4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:
4.2.1.120
5.3.3.3
]
Organism
niw
Candidatus Nitrosopumilus sp. SW
Pathway
niw00650
Butanoate metabolism
niw00720
Other carbon fixation pathways
niw01100
Metabolic pathways
niw01120
Microbial metabolism in diverse environments
niw01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
niw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Nisw_03935
09102 Energy metabolism
00720 Other carbon fixation pathways
Nisw_03935
Enzymes [BR:
niw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.120 4-hydroxybutanoyl-CoA dehydratase
Nisw_03935
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.3 vinylacetyl-CoA Delta-isomerase
Nisw_03935
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Gene cluster
GFIT
Motif
Pfam:
HpaB_N
HpaB
Herpes_LP
Motif
Other DBs
NCBI-ProteinID:
QDI88732
UniProt:
A0A514LA61
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Position
complement(633449..634963)
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AA seq
504 aa
AA seq
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MSEIKTGADYIESLRGRDLKIYLFGELIENYVDHPIIRPSINAVAETYDLAVREEALASA
DSSLSGLKVNRFLHIAESAEDLVLQNKMQRKLGQNTGTCFQRCVGMDAMNALHSTTFEID
EKHGTDYHKRFLEFVKMVQKENFVIGGAMTDPKGDRSKGPSEQDDPDLFTRVVDTDEKGV
YVSGAKAHQTGCINSHWIILMPTIRLTEDDKDWAIVGAIPADAKGVTYIYGRQSCDTRSM
EEGDIDDGNAKFGGQEALIILDRVFIPWDKVFMHGEYEFASMLVERFTCYHRRSYVCKTG
LGDVLIGAAATIADYNGIPKVSHIKDKIIEMTHLNETIFAAGIASSHQGQKMKSGVYLND
DMLAQVCKHNVTRFPYEISRLAQDIAGGLVVTLPSEKDFRHPEAGPLLKKYLAGRKGVDV
ENRMRILRLIENMTMGRNAVGYLTESMHGAGSPQAQRIQIQRQMQVGYKKNLAKNLAGIT
NDIEEPKESSEYFKRVFKTKDSVL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaattaagactggtgctgattatattgaaagccttagaggacgtgatctcaaa
atttacctctttggcgaattaatcgaaaattatgttgatcatccaattattagaccctcg
attaatgcagttgcagaaacttatgatttagcggttcgtgaagaagcactagcatcagct
gactcatctctttctggattgaaagttaaccgatttttacatattgcagaaagtgctgaa
gatttagttttacaaaataaaatgcaaagaaaattgggtcaaaacactggaacatgtttc
caaagatgtgttggtatggatgccatgaatgctttacattctactacttttgagattgat
gaaaaacatggaactgattaccataaaagatttttagaatttgtaaagatggttcaaaaa
gaaaattttgtcattggtggtgctatgactgatcctaaaggcgacaggagtaaaggtcct
tcagaacaagacgatcctgatttgtttactcgtgttgttgatactgatgaaaaaggagtt
tacgtttctggtgccaaagcacatcaaactggttgtattaactctcactggattattttg
atgccaactatcagacttacagaagatgataaagattgggcaattgtaggtgcaatccct
gcagatgcaaaaggtgtcacttacatttacggtagacaatcctgtgataccagaagtatg
gaagaaggtgatattgatgatggtaatgcaaaatttggtggacaagaagcactaatcatc
ttagatagagtattcattccgtgggacaaagtcttcatgcatggtgaatatgaatttgca
tcaatgcttgtagaacgttttacatgttatcatagacgaagttatgtttgtaaaacagga
cttggcgatgtattaattggagctgcagcaacaattgccgattataatggtataccaaaa
gtttcacacattaaagataaaatcatcgaaatgactcatcttaatgaaacaatttttgca
gcaggtattgcatcttctcatcaaggacagaagatgaaatctggtgtttatcttaatgac
gatatgcttgcacaagtttgcaaacataatgttactagattcccatatgagatcagtaga
cttgcacaagatattgcaggtggtttggtagttacacttccatctgaaaaagactttaga
catccagaagcaggtccattacttaagaaatatcttgctggtagaaaaggtgttgatgtt
gaaaacagaatgagaattctaagattaattgagaatatgactatgggtagaaatgctgtt
ggatatcttactgaatcaatgcatggagcaggctctccacaggctcagagaattcaaatt
caaagacagatgcaagtaggttacaaaaagaatctggcaaagaatcttgctggaattaca
aatgatatcgaagaacctaaagaatcttcagaatattttaaacgagtcttcaaaacaaaa
gattctgttctctaa
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