Nitrospira japonica: NSJP_3286
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Entry
NSJP_3286 CDS
T05001
Symbol
ttgC
Name
(GenBank) RND efflux system, outer membrane factor lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
nja
Nitrospira japonica
Pathway
nja01501
beta-Lactam resistance
nja02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nja00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NSJP_3286 (ttgC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NSJP_3286 (ttgC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nja02000
]
NSJP_3286 (ttgC)
01504 Antimicrobial resistance genes [BR:
nja01504
]
NSJP_3286 (ttgC)
Transporters [BR:
nja02000
]
Other transporters
Pores ion channels [TC:
1
]
NSJP_3286 (ttgC)
Antimicrobial resistance genes [BR:
nja01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NSJP_3286 (ttgC)
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
NSJP_3286 (ttgC)
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
NSJP_3286 (ttgC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF3209
Motif
Other DBs
NCBI-ProteinID:
SLM49453
UniProt:
A0A1W1I9H6
LinkDB
All DBs
Position
I:3147655..3149097
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AA seq
480 aa
AA seq
DB search
MRDVMLRSFLVGLLGLLVSCKMGPDYARPAIPVSDSFRMAEEEKNLQSFANVPWWDLYRD
EELQKLIRLALEGNKDLKRAVATVDEFAARVLVTRTDFAPQMNVAVNAPGFGNTRNLSFP
GFPNLFNYYVQGNLAWELDIWGRIRRSNEAAIGDLLSREENRRGIILQIVSGVAQAYFEL
RQFDLQRDIALRTLDAWDESVRIARARFKQGYIHRLDVEQFEAERENAAARIAELKRQIV
QKENELSVLLGRNPHQISRGRALTEQVMPPVVPAGLPSELLQRRPDVVQAEQQVAAATAR
IGQAKADRFPKLSITGILGIASPQLTQLVAHETFFGVAGPSVAGPLLNAQVLGFQQEAAE
AQARQTVAQYEQTILVAFREVEDSLVAVSTADEQVAAQARQVKALQAALHLANLRYKGGI
ANYLDVLIAQRNLFDAELSLASTRRLHLVSVVQLYKALGGGWLPAPATESQESEQHARME
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgtgatgctccgatcgttcctggtgggactactgggactgctggtctcctgc
aagatggggccggactatgccagacctgccattccagtttccgactcattccgcatggcg
gaggaagaaaagaacctgcaatccttcgccaatgttccgtggtgggacctctatcgagat
gaggaactccagaaactcattcgtctcgcgctggaggggaacaaggatctcaaacgggcc
gtggcgaccgttgacgaattcgccgcgcgagtgcttgtcaccagaaccgattttgctccc
cagatgaatgtggcggtgaatgcgccgggcttcggcaatacgagaaatttgtccttcccc
ggatttcccaacctgttcaactactatgttcagggcaatctcgcctgggaactggatatc
tggggacgaatccgccggtccaatgaggcggcgatcggagacttgctctcccgggaagag
aaccggcggggcatcattctgcagatcgtcagcggagtggcccaagcctacttcgaatta
cggcagttcgatttgcagcgggacatcgccctgcggaccttggacgcgtgggatgaatcc
gtgcggattgcccgggcgcgattcaaacagggctatatccataggctggacgtcgaacag
tttgaggccgagcgggagaatgccgcggcccggattgcggaattgaagcggcagatcgtg
cagaaggagaacgagctcagcgtgttgctagggagaaatccccatcaaatctcgaggggg
cgggccctgaccgaacaggtgatgccgccggtcgtgccggccggccttccctcggaatta
ctccagcgccgtccggacgtcgtgcaggccgagcaacaggtggccgccgcaaccgccagg
atcggtcaggccaaggccgaccgatttcccaaactgagcatcacgggcattctcggtatc
gccagtcctcagttgactcagttggtggctcacgagaccttcttcggagtggcgggtccc
agcgtggccggccccttattgaatgcacaggtgttgggtttccaacaggaggcggctgaa
gcccaagcaagacagaccgtcgcccaatacgaacagaccattctggtggcgttcagagaa
gtggaggattcgttggtggcagtgtccacagccgatgagcaggtggccgcacaagcgcgg
caggtcaaggcactccaggcggcactgcacctggcgaacctgcgctataaaggcgggatt
gccaactatctcgatgtcctcattgcccagcggaacctcttcgatgccgaattgtcattg
gcttcgacgcgccgactgcacctcgtctcggtggttcaactctacaaggccctgggcgga
ggctggctgccggcaccggccacggagagccaagaatcagagcagcacgcccgcatggaa
tag
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