Nitrosospira lacus: EBAPG3_014595
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Entry
EBAPG3_014595 CDS
T04907
Name
(GenBank) channel protein TolC
KO
K12340
outer membrane protein
Organism
nlc
Nitrosospira lacus
Pathway
nlc01501
beta-Lactam resistance
nlc01503
Cationic antimicrobial peptide (CAMP) resistance
nlc02020
Two-component system
nlc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
EBAPG3_014595
09132 Signal transduction
02020 Two-component system
EBAPG3_014595
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EBAPG3_014595
01503 Cationic antimicrobial peptide (CAMP) resistance
EBAPG3_014595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nlc02000
]
EBAPG3_014595
02044 Secretion system [BR:
nlc02044
]
EBAPG3_014595
01504 Antimicrobial resistance genes [BR:
nlc01504
]
EBAPG3_014595
Transporters [BR:
nlc02000
]
Other transporters
Pores ion channels [TC:
1
]
EBAPG3_014595
Secretion system [BR:
nlc02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
EBAPG3_014595
RTX toxin transporter
EBAPG3_014595
Multiple protein transporter
EBAPG3_014595
RaxAB-RaxC type I secretion system protein
EBAPG3_014595
Antimicrobial resistance genes [BR:
nlc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
EBAPG3_014595
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
EBAPG3_014595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF4272
Motif
Other DBs
NCBI-ProteinID:
ARO89167
UniProt:
A0A1W6STP5
LinkDB
All DBs
Position
complement(3200530..3201876)
Genome browser
AA seq
448 aa
AA seq
DB search
MGIYREALEQDAQYSAARAAHQAAQEKLPQGRAGLLPTITLAGVRRRQYIDIQSVTTGIG
TGTGTGVRPPEVVIDNTSITITATQPIYRKENFVIYEQSKLQVAQADSQFIIAAQELILR
VAQAYFDIQLALINVEVAEAQKRAIGEQLAQAKRNFQVGTATIVDTHEAQARFDLALSQE
IAARSDLEVRKRALQQIIGRLPDDLTRPNENFPDLLNLKYANMQDWINVAEQNNLALKVQ
QSVYEIAKQDVERAKAGHYPTLDLVALYSDQRGVGGTITGRPIDLTSKEIGVQLSFPIFQ
GFAVQSRVREALATQEKVFQDLNNTRRNSVLQVSQQYLNVTNGIAQVKALRQAVTSSQSQ
VDSTKLGQEVGVRTEVDVLNAQQLHYSARRDLAQARYNFLMSKLRLEAEAGELDEEDLRQ
INEVLAKGSAFGVSSSNGQDPSSVSHVQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgggaatttatcgtgaggcgctggagcaggatgcgcaatacagcgccgcgcgcgccgcg
catcaggcggcccaggagaaactgccgcagggccgggccgggctgcttccgactatcaca
ctcgcgggtgtgcgccggagacagtatatcgatatacagagcgtgacgaccgggatcggc
accgggaccgggaccggcgttaggccgcccgaagtcgtcatcgataacacgagtataacg
atcacggcaacccagccgatttaccgcaaggaaaatttcgtaatctacgagcaatccaag
cttcaagtcgcccaagcggattcccagttcatcatcgcggcccaagagctgatcctgcgt
gtagcgcaggcttattttgacattcaattggcgttgataaacgtggaggtggcggaagcc
cagaagagagccattggagaacagctcgcacaagccaagcgcaactttcaggtcgggaca
gccaccatcgtcgatacacacgaggcccaggcacgatttgatttggcgctctcgcaggag
attgccgcccggagcgatctggaagtccgaaaacgcgcactgcaacagattatcggccgt
ttgccggatgatctcacacgtccaaacgagaactttcctgatctgctcaatctgaagtat
gcaaatatgcaggattggatcaacgtggctgaacagaataatcttgccctgaaagttcaa
caatcggtgtatgaaatcgcaaaacaggatgtggaacgggccaaggcgggacactatccg
actctcgatctggttgccctgtacagtgatcagagaggtgttggggggacaatcaccggc
cggccaattgacctgacctcaaaggaaatcggagttcaattgagttttccgatatttcag
ggtttcgcggtgcaatcacgtgtgcgcgaggctctggccacccaggagaaggtattccag
gatctgaataatacccggcgcaatagtgtacttcaagtgagccagcagtatcttaatgtc
accaatggcattgcgcaggtgaaggcgctgcggcaagcggtaacatccagtcaaagccag
gtggattccaccaagctggggcaggaagtgggtgtcagaaccgaagtggatgtattaaac
gcgcagcaattgcactattccgcgcggcgggatctcgcccaggcgcgttacaattttctc
atgtccaagttgagactggaggcggaagcgggtgagttggatgaagaagatctgaggcag
ataaatgaggtgctggcaaaaggaagcgcctttggtgtttcctcttccaacgggcaagac
ccaagttcagtgtcccatgttcaataa
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