Numida meleagris (helmeted guineafowl): 110389878
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Entry
110389878 CDS
T06015
Name
(RefSeq) interstitial collagenase-like
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
110389878
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nmel01002
]
110389878
Enzymes [BR:
nmel01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
110389878
Peptidases and inhibitors [BR:
nmel01002
]
Metallo peptidases
Family M10
110389878
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Astacin
Reprolysin_5
Reprolysin_4
Peptidase_M54
DUF4953
Peptidase_M66
Reprolysin_2
Motif
Other DBs
NCBI-GeneID:
110389878
NCBI-ProteinID:
XP_021236581
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All DBs
Position
1:180447542..180454103
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AA seq
467 aa
AA seq
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MKKVHSLLLLLCVAVSSAFPAAHEKEDEGKNINLVETYLQNFYNLQKDHRPHLRQGGQNH
LAEKLKEMQEFFGLQVTGKPDHDTLEMMKKPRCGVPDVEQYVFTPGNPKWKKNNLTYRIV
NYTSKMRRTDVDEAIQKALNVWSSVTPLTFQKIEDNIADIMISFAYRDHKDNSPFDGPNG
LLAHAFQPGEGIGGDVHLDEEETWTKDGTGYNLFIVVAHELGHSLGLSHSNDPGALMYPT
YAYTDPKEFLLPQDDIDGIQAIYGQSNDAVQPTGPTTPQVCDPNLTFDAITTLRGEMMFF
KGRYMLRKHPERSETELNFISLFWPNLPSGIQAAYENIERDEVLLFKEDKYWVIRGYDIA
YGYPKPIYRLGFPKTVKRVNAAYSDETTGKTYFFVADRYWRYDENKKSMDHGYPRKIIYD
FGKIGRVDAAFQKDGYVYFFHKTTQFQFDPRAKRIVSQMKSISWFNC
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggtccattctcttctcctgttgctgtgtgtggctgtctcctctgcttttcct
gcggctcatgaaaaagaagatgaaggaaaaaatataaatctcgtggagacttatctacag
aatttctacaacctccaaaaagatcatcggcctcatctaaggcaggggggtcaaaatcat
cttgctgaaaagctcaaggaaatgcaggaattctttggactacaagtgactgggaaacct
gatcatgacactctggagatgatgaagaaacccagatgtggtgttcctgatgtagagcaa
tatgtgttcacaccagggaatccaaaatggaagaaaaataatctgacatacaggattgtg
aattacaccagcaagatgagacgaactgatgtagatgaagcaatccaaaaagctctgaat
gtctggagcagtgtgacaccattgacgtttcaaaaaattgaggacaacattgcagatata
atgatctcatttgcttatagagatcacaaggacaactctccttttgatggccctaatggg
ctgctggctcatgcttttcaaccaggagaaggtattggtggagatgtgcatcttgatgag
gaggaaacctggacaaaagatggaacaggctacaacttgttcattgttgttgcccatgag
cttggccattcactgggtctgtctcattcaaatgatcctggagcactgatgtatccaact
tatgcctacacagaccccaaagaatttcttcttcctcaggatgacattgatggcattcaa
gccatatatggacagtctaatgatgctgtgcagcctacagggcccacaactccacaagtc
tgtgaccctaatttgacatttgatgccattaccactttgcgtggagaaatgatgttcttt
aagggcagatatatgctgcgcaaacatcctgagaggtcagagacagagctcaattttatc
tcactgttctggccaaatttgccatcaggaattcaagctgcttatgagaacattgaaagg
gatgaagttttactctttaaagaggataaatactgggttatcagaggatatgacattgca
tatggctatccaaaacccatctatcgtttgggattcccaaagactgttaaaagagttaat
gcagcttacagtgatgagaccacaggaaaaacatatttctttgtagctgacagatactgg
agatacgatgaaaacaaaaaatccatggatcatggttatcccaggaagataatctatgac
tttggaaaaattggcagagttgatgcagctttccagaaggatggctatgtctacttcttc
cacaaaacaactcagttccagtttgatcctcgtgccaaacggattgtcagtcaaatgaag
agcattagctggtttaattgctaa
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