Candidatus Nitrospira neomarina: PQG83_04040
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Entry
PQG83_04040 CDS
T09428
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo01501
beta-Lactam resistance
nneo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PQG83_04040
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PQG83_04040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nneo02000
]
PQG83_04040
01504 Antimicrobial resistance genes [BR:
nneo01504
]
PQG83_04040
Transporters [BR:
nneo02000
]
Other transporters
Pores ion channels [TC:
1
]
PQG83_04040
Antimicrobial resistance genes [BR:
nneo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PQG83_04040
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PQG83_04040
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PQG83_04040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HH_AprE
Motif
Other DBs
NCBI-ProteinID:
WNM64151
UniProt:
A0AA96GV27
LinkDB
All DBs
Position
complement(895779..897311)
Genome browser
AA seq
510 aa
AA seq
DB search
MIALHVSACLPHVDLAPDYQPAEFVVPVSWHGSSPFVEAKPSDGELRQDWWTLYNDPVLN
NLEEQAMGANPDLQAAAERFVQARDMMMKARSRRIPHAGLGFGASDNRQSENRLFRDPDI
SDTASTVSVGGIASWEPDFWSAIRNATRVEMYRAEERAAEYGLARLSLQAEIAANYFTLR
GLDAQLAIYTQSIDLYRGSLNLINEQFTVGIASMLDIARVESLLFSTETKEAEIRGQRQV
TEQAIAILLNRAPASFTIEPVADLRVENFEVPQTIPSTLLERRPDIAAMERRMAQANRAI
GIARAAFYPNVTFRAGGGFEDTGFDLIKLANSFWSYGSAIELPLFQGGFRRAQLQQSWSV
YRETEDRYRSTVLNAFREVENNLSLTNQLTTAAKRQDAAVGAYLKTQDLTSSLYFGGLAS
SLELIYAEVNTLAARIDSVAIKANLLKSSVALIRALGGGWNRNQLPADEQIQPFDTFQYV
DLDKPPSAGGIDVNADNNGVNNDLTKPPTP
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgattgcccttcatgtatcggcatgtttgccacacgtggatctcgcgccggattatcaa
ccggccgaattcgtcgtccccgtttcatggcacggttccagtcccttcgtcgaagcgaaa
ccctcggatggtgaattacgacaagattggtggacactctataacgatccggtattgaac
aaccttgaagaacaggctatgggtgctaatccggatctccaagcggctgctgagcgcttt
gtccaggcccgcgatatgatgatgaaagcccgttcacggcgtatcccacatgccggtctg
gggttcggcgcctccgacaacagacaatcagaaaatcgtctgtttcgcgatcctgatatt
tcggatacggcctcgacggtttccgtcggagggattgcatcatgggagccggatttctgg
tcggcaattcgcaacgccacgcgtgtagagatgtaccgggccgaagagcgtgcggctgaa
tatgggcttgcacgcctcagtttgcaggcggaaattgcggcgaactatttcacccttcgt
ggcctcgacgcgcaactggcgatttatacccaatcaatcgacctctatagaggttcactc
aatttgattaatgagcagtttacggtcgggatcgcgtccatgctggacattgcccgcgtg
gaatctctgttgttcagcactgagacgaaggaggccgaaattcgaggccaacgccaggtg
actgaacaggcgattgccatcctcctcaatcgggcaccggccagtttcacgatcgaaccg
gtcgccgacctccgtgtggaaaatttcgaggtgccccagaccattccatcaaccttattg
gagcgtcgccccgacatcgcagcgatggagcgacggatggcccaggccaatcgtgccatc
ggcatcgctcgcgcagccttttatcctaatgtgacgttccgggccggaggggggttcgaa
gataccggcttcgatttgatcaagcttgccaatagtttctggtcctacgggtccgccatt
gagctcccgcttttccagggtggatttcgccgcgcccaattgcagcagtcctggtcggtt
tatcgcgagacggaggaccgataccgttcgacggtgctcaacgcctttcgcgaagtcgag
aacaatttgagtctgaccaaccagctcaccactgcggccaaacggcaggacgccgccgtc
ggggcctatctcaaaacgcaagacctgacctctagcctctattttggcggactcgcctcc
agtcttgagctcatttacgccgaggtcaacacgctagcggcgcgtatcgactccgtagca
attaaggctaatctgctgaaatcttccgtggccctcattcgcgcgctgggcgggggctgg
aaccgcaaccaattgcccgccgatgaacagattcagcccttcgatacgttccaatatgtc
gatcttgataaaccaccatcagccgggggaatcgatgtcaacgcggacaataacggggtg
aataatgatttgaccaaaccacccactccttga
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