Candidatus Nitrospira neomarina: PQG83_11940
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Entry
PQG83_11940 CDS
T09428
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo01501
beta-Lactam resistance
nneo01503
Cationic antimicrobial peptide (CAMP) resistance
nneo02020
Two-component system
nneo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PQG83_11940
09132 Signal transduction
02020 Two-component system
PQG83_11940
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PQG83_11940
01503 Cationic antimicrobial peptide (CAMP) resistance
PQG83_11940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nneo02000
]
PQG83_11940
02044 Secretion system [BR:
nneo02044
]
PQG83_11940
01504 Antimicrobial resistance genes [BR:
nneo01504
]
PQG83_11940
Transporters [BR:
nneo02000
]
Other transporters
Pores ion channels [TC:
1
]
PQG83_11940
Secretion system [BR:
nneo02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
PQG83_11940
RTX toxin transporter
PQG83_11940
Multiple protein transporter
PQG83_11940
RaxAB-RaxC type I secretion system protein
PQG83_11940
Antimicrobial resistance genes [BR:
nneo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
PQG83_11940
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
PQG83_11940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
PV-1
Motif
Other DBs
NCBI-ProteinID:
WNM60474
UniProt:
A0AA96GE38
LinkDB
All DBs
Position
2769301..2770896
Genome browser
AA seq
531 aa
AA seq
DB search
MRWTTIYQALTGLAFLAGIFLSELVWPPISESRSARPVETEEWSFQELLPSESVITLTLQ
EAVMEALEHNLDIQVSRHTRDLRLTDIVFQQAQFDPTVELGGRYDRTVVPLNRPIFGLGG
ITVGSIPDTFDQNETNFSLGLNQKLLTGGSYDLTFDTRRNSVAGSTSFLFNPAYSSNVLF
NLTQPLLRNFGPSINNIQITLAQNAADVEQLTLLNQILSVIAQVEQAYWELVFARENLKV
ARATLQAAEELLASNRAKVKAGVMADVEALQAQAGVANQIEQILLAQKTVLDQEDQLRLL
LSKSEFNLTQTTPLVPLDPPIQHLQETPLKENLEVAFEQRPDILQAKKNIETSNVNTRFA
KNQLLPDLSFQGSLGLSGLGKTPRDDWDRLGSTDFYNMGGGLVLSYPIGNRSAQSQYQRR
ILETQQSQVSLLRVRQQIILDVKEAIRQVQTSFKRTRTNQTARQLSERQLNAEQERLNLG
LSTTRLVLEFQRDLRIARGRELRAILDYNQSLSRLRLVTASTLDHYNIKIQ
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggaccacgatataccaagctctgactggactggcttttttggccgggattttc
ctcagcgaactcgtatggccaccgattagtgagagccgatccgccagacccgttgagacg
gaagaatggtcctttcaggaactcctgccatctgaatccgtcatcacgctgacgttgcag
gaagccgttatggaagcattagaacataatttggacattcaagtgagccgacacacgaga
gatcttcgactcaccgacattgtctttcaacaggcacaatttgaccccacggttgagctc
ggcggacggtacgaccggacagtcgtcccactcaataggcccatattcggccttggaggc
atcacggtaggatcgattccagacacctttgatcaaaatgaaacaaatttcagcctggga
ttgaatcaaaagttgctgaccggcggatcgtacgatctgacctttgacacaagacggaat
tccgtagccggatcaaccagctttcttttcaacccggcctattcaagtaatgtcctcttt
aatctgacgcaaccacttcttcgcaacttcggaccttcgatcaacaatatacaaatcacg
ctcgcacaaaacgcagctgatgtggaacaactgacactccttaaccagatcctgtcggtg
atcgcccaagtcgagcaagcgtattgggaactcgtctttgcccgggagaacctaaaagtc
gctcgggcgaccttacaggccgcagaagaattactcgccagcaaccgcgcaaaggttaaa
gccggggtgatggccgatgtagaggcccttcaggctcaggcaggggtagccaaccagatc
gaacaaattttgctggcccaaaaaaccgtcctggatcaggaagatcaacttcgactcctc
cttagtaaatcggaattcaacctgacccaaaccacaccccttgtcccactcgacccacct
attcaacatcttcaggaaaccccgctcaaagaaaacctagaggtagcattcgagcaacgt
ccggacattcttcaagccaaaaagaacattgaaacgtccaacgtcaatacccgctttgcc
aaaaatcagcttctacccgacctctcgtttcaaggaagtttggggcttagcggactgggg
aaaaccccccgggatgactgggatcgtttaggcagcacggatttttataacatgggagga
ggactcgtcctcagttaccccataggaaaccgttcggcgcagagtcaatatcaacgccgg
atcctggaaactcaacaaagccaggtctctctcctacgcgttcgccaacaaattatcctg
gacgtcaaagaagccatccgtcaggtacagacgagcttcaagcgcaccagaacgaatcag
acggctcgccaattgtccgaaaggcaactcaatgcggagcaggaacgcctcaatctcggg
ctcagcaccactcgattagttttagaatttcaaagagatcttcgaatagctcgaggtagg
gaattacgagccatcctggactacaaccaatcattatcacgccttcgcctcgtcaccgcc
tctacactcgatcattacaacattaaaattcagtga
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