Nitrosococcus oceani: Noc_1275
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Entry
Noc_1275 CDS
T00281
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT
KO
K18139
outer membrane protein, multidrug efflux system
Organism
noc
Nitrosococcus oceani
Pathway
noc01501
beta-Lactam resistance
noc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
noc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Noc_1275
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Noc_1275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
noc02000
]
Noc_1275
01504 Antimicrobial resistance genes [BR:
noc01504
]
Noc_1275
Transporters [BR:
noc02000
]
Other transporters
Pores ion channels [TC:
1
]
Noc_1275
Antimicrobial resistance genes [BR:
noc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Noc_1275
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Noc_1275
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Noc_1275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
ABA57775
UniProt:
Q3JBM1
LinkDB
All DBs
Position
complement(1411795..1413567)
Genome browser
AA seq
590 aa
AA seq
DB search
MIKHNTIGKGAYRKSHARVFVRRARSGCVSLLTLALSACMGGPAIDLTPDYQPEQFILPD
SWRGSGPFAKANPSEGELRPDWWKLYDDPVLNELEKQAMEANPDLHAAAERFIQARAIMM
KVRSRLIPQLGVGFGASNNKQSEERLFRGLGEPDRETTLEFGGLASWEPDFWSRIRNRTR
MKIYRAEQRAAEYILARLSLQAEVATNYYTLRSLDGQAAILSQSVNYYKDLLGVVEDRFN
GAISPKIDVTRTQFLLFSTEARLLNIQAQRQVIEHALAVLVNRSASSFKIEPLDEFPMAK
FQLPVEIPSTLLERRPDIAAMERKMAQANRTIGIARAAFYPHISFGAGSGFEGGTGLFDL
AKSFWSYGLEVRLPIFQGGHRRARLQQAWSVYRETVDDYRSTVLNAFREVENGLSRTNLI
SAQVEKLITSVEAALETQNLTVNLYQGGLATSLDLLFAQINTLDARIEVVRGKAELMKSS
VELVRALGGGWNREQLPTDEQIQPFGVLQYNDLGKPQPVGGIDAPTSNDGRYSEQYDDLT
QSIQGIAIPAGNRGETKELIIHPPGEMSVPKMAVPPEEMETTDNNREGNK
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagcacaacactatcggtaagggggcataccgaaagagccatgcccgcgtgttt
gttcgccgcgcccgaagcggttgcgtttccctattaacgctcgctttgtctgcttgcatg
ggaggtcccgccatcgatctgacgcccgactatcagccggaacaatttattctccccgac
tcatggcgcgggtcggggccatttgctaaagcgaatccatcggaaggcgaactacgcccg
gattggtggaagctttatgatgacccagttttgaatgaacttgaaaaacaggcgatggaa
gccaaccccgacctccatgccgccgccgagcggttcatccaggctcgcgccatcatgatg
aaggtccgctcgcgtctcattccccagctgggagtaggattcggcgcttccaacaataaa
cagtcggaagagcggctattccgcggccttggcgagccggaccgggaaacgacgcttgag
ttcgggggacttgcttcctgggagccagatttctggtcaagaatccgcaatagaacccgc
atgaaaatctaccgcgccgagcaacgggccgctgaatatatactcgcccggctcagcctg
caagcagaagttgcaaccaattactacacattgcgcagcctggatgggcaagcggcgatc
ctgagtcaatcagtcaactactacaaagacttgctaggtgtcgttgaagaccgtttcaat
ggcgctatttcgccaaaaattgacgttacccgtactcaatttctgttattcagcaccgag
gcgagactacttaatattcaggcccaacgacaagtcatagaacatgcgctcgccgtgctc
gtcaaccggtcggcgagcagctttaaaatcgagccgcttgatgagtttcccatggctaag
ttccaattaccggtagaaattccatcgaccttactggagcgccggcccgacatcgccgcc
atggagcgcaagatggcccaagcgaaccgcactatcggcatcgcccgcgccgccttttac
ccccatatctctttcggggccggcagcggatttgaaggaggtaccggcctattcgatttg
gccaagagtttctggtcctacggattggaggttaggcttccaattttccaaggtggacat
cgccgcgcccgattgcaacaagcttggtccgtttatcgcgaaacggtagacgattaccgt
tcgacggtgctcaatgcctttcgtgaagtcgagaacggtttgagcagaacgaatttaatc
tccgcccaagtcgaaaaactgataacctcggtcgaagccgcccttgaaacacaaaatctg
accgtcaacctctatcaagggggactggcgaccagtcttgatcttctgttcgcgcaaatc
aacactctggatgcacgcatcgaggtagttaggggtaaagccgagctgatgaaatcctcg
gttgagctcgtccgggcccttggcggaggctggaaccgcgaacaactgcctaccgacgaa
cagatacaacccttcggcgttcttcaatataacgaccttggcaagccccaacccgttggg
ggaatcgatgccccgacgagcaatgatggcagatatagtgagcagtatgatgatctcact
caatccatccagggaatcgctatacccgcgggcaacaggggggaaaccaaggaactcatc
attcatccccctggagaaatgtctgtgcccaaaatggccgtaccccctgaagaaatggaa
acaacggacaataacagagaaggcaataagtaa
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