Novosphingobium sp. P6W: TQ38_012675
Help
Entry
TQ38_012675 CDS
T05550
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
nov
Novosphingobium sp. P6W
Pathway
nov01501
beta-Lactam resistance
nov02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TQ38_012675
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TQ38_012675
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_012675
01504 Antimicrobial resistance genes [BR:
nov01504
]
TQ38_012675
Transporters [BR:
nov02000
]
Other transporters
Pores ion channels [TC:
1
]
TQ38_012675
Antimicrobial resistance genes [BR:
nov01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
TQ38_012675
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
TQ38_012675
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
TQ38_012675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AXB77239
UniProt:
A0A2Z5EC86
LinkDB
All DBs
Position
1:complement(2623496..2624959)
Genome browser
AA seq
487 aa
AA seq
DB search
MSTHMNPRFAAASLLAITLSLGACTAPDLGPRPQLTPPGGLEAGQSLTSNSPALRDWPRE
RWWTAYGDPQLDALVEEALAGSPSVAAAQARIRQARGAAGVAGAALLPTLGGQGSAGFTK
QSYNNGVPAEFVPKGWNSTGTLALSGDFDLDLWGANRKALAAATSEAEAVEADARQAELM
ISSNVVSSYFDLARLVERGKALADANKARGSFVDLTGQREREGIDNQAPMRRAEAAAATA
RAAFSANEEQTLLRRHALAALLGKGPDRGLAITPPAIATVPEVGIPTDAGIALAGRRPDI
VAARLRAEAAGARIDQAKAAYMPNISLRGLFGLTSLGLSNLIDSGSTYGNGIGALSLPIF
QGGRLKGQFTQARGGYDAAVANYNDTVVGALQEVADALASRDAAAGQERDAAEAARTSQV
GYDLSMQRFRGGLSNYLDALTAQTDALQAREAAIDAHFRTLALEVALQRALGGGFADNSS
EKAPDND
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgcatatgaacccgcgattcgcggcagcgtcgctgctggcgattacactttcc
ctcggggcctgcacggcgcctgatctgggcccgcgtccgcaattgacgccgccaggcggg
ctggaggctggccagtcactgaccagcaacagtcccgccttgcgcgattggccgcgagag
cgctggtggactgcctatggcgatccccagcttgacgccctggtggaggaagcgctggcc
ggatcgcccagcgtcgctgcagcccaggcccgcattcgccaggcgcgcggtgcagccggg
gttgccggtgccgcattgctccccacgctgggcgggcagggctctgcgggtttcaccaag
cagtcctacaacaacggcgtgcccgccgaattcgttcccaagggctggaacagcaccggt
acgctggcgctctcgggcgacttcgacctcgacttgtggggcgcgaaccgtaaggccctc
gccgctgcgacgtctgaagccgaagccgtcgaagccgacgcccggcaggccgagctgatg
atttccagcaacgtggtctcctcctattttgacctcgcccgactggtcgaacgcggcaag
gcgctggccgatgccaacaaggcgcgcggctctttcgtcgacctgaccggtcagcgcgaa
cgggagggtatagacaatcaggcgccgatgcgccgtgcggaagcagcggctgccactgcg
cgcgccgcattctctgccaatgaagaacagaccctgcttcgccggcacgcgcttgccgcg
ctgctcggcaaaggccccgaccgtggactggcgatcacccccccagccatcgccacggtt
cccgaggtgggaattcccaccgatgcgggcatcgcgctcgcaggccgccgtcccgacatc
gtcgcggcgcgcctgcgagccgaggcggccggcgcccggatcgatcaggccaaggctgct
tacatgcccaacatcagcctgcgcggtctgttcggcttgacgtcgctgggcctgtccaac
ctgatcgacagcggttcgacctacggaaacggcattggcgcgctcagtctgccgatcttc
cagggtggacgcctgaaaggccagttcacgcaggcgcgcggcggctatgacgctgccgtc
gccaattataacgacaccgtggtgggcgcgttgcaggaagtcgccgatgcgcttgccagc
cgcgatgccgccgccggtcaggagcgcgacgcggcggaagcggcgcggacctcgcaggtc
ggctacgacttgtcgatgcagcgctttcgcggcggcctgtccaactatctcgatgcactg
accgcccagaccgatgctctgcaggcgcgcgaagccgcgatcgatgcccatttccgtacc
ctcgccctggaagtcgcgctgcaacgcgcgctgggcggcgggttcgcagacaattccagt
gagaaggctcccgacaatgactga
DBGET
integrated database retrieval system
