Novosphingobium sp. P6W: TQ38_027975
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Entry
TQ38_027975 CDS
T05550
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
nov
Novosphingobium sp. P6W
Pathway
nov01501
beta-Lactam resistance
nov02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TQ38_027975
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TQ38_027975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nov02000
]
TQ38_027975
01504 Antimicrobial resistance genes [BR:
nov01504
]
TQ38_027975
Transporters [BR:
nov02000
]
Other transporters
Pores ion channels [TC:
1
]
TQ38_027975
Antimicrobial resistance genes [BR:
nov01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
TQ38_027975
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
TQ38_027975
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
TQ38_027975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AXB80402
LinkDB
All DBs
Position
pP6W1:503415..504731
Genome browser
AA seq
438 aa
AA seq
DB search
MPPAALVAAPSDWRIGGSPLRGIDRDWWVQFGDPALDELVERALAQNVDLMAAGAKISEA
RAQFRLSESHGQPSAGLSIGGGPTRTISAFGEGVDQTQSSAQLSVSYEVDLFGRLSAATD
ASRQTLIATEFERDATRVALISTVVTGYVGLRSLDMQLQTTIDTVNSRAAELTVLRRRSA
AGYSSQLDLLQAEAVFEAAARLVPATRLAITKQESALSVLVGDAPGAIARGADLEGLGPL
EIPHMLPAAVLRQRPDIAEAEAHIVAADRNLDSARAAFMPRIQLSANAGGVASTALPSPV
SLFSIGSSILAPLFQGGALRASADAAAARRDQAAFAYRKTALTAFQEVEDALAGVVRNGE
ERETATRQVASLRAALDLARRRYRAGYSSYLDQLDAERSLLEAQLQLIDLHRKRLASVVA
LYQSLGGGWQRSDRYPQS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggcagcgttagtcgcagcgcccagcgattggcgcatcggaggatcgccgttg
cgtgggatcgacagggactggtgggttcagttcggagatccggcccttgacgaactggtc
gagcgggcgcttgcgcaaaatgtcgatctaatggcagccggtgcgaagatatctgaggcg
cgcgctcaattcagactctccgagagccatggtcagccttcggctggcctatcgataggc
ggtgggccaacccggaccatcagcgcgttcggcgaaggcgttgatcagacccagagtagc
gcacagctgtcggtctcttacgaggtcgaccttttcggtcgcttgtcggccgcgacagat
gcgagccggcaaacgctcatcgcaaccgagtttgagcgggatgcgacccgcgtcgcactc
atttcgacggtcgtcaccggctatgtagggctgcgctcgttggacatgcaactgcagacc
acaattgataccgtcaattcgagggcggcggagttgaccgtgctacgacgtagatcggct
gccggttattcctcgcagctcgatcttctgcaggctgaagccgtattcgaggcggccgcc
cggctggtgccggcaacgcgccttgctattactaagcaggaaagcgcgctgagcgtactg
gtcggtgacgcgcctggggcgatcgcacgcggggccgacctcgaagggcttggaccactc
gaaattccgcacatgctaccagctgccgtgttgcggcaacgaccggatatcgcggaagcc
gaagcgcacatcgtggcggccgatcgcaacctggactcagcccgcgcggccttcatgccg
cgcattcaactttcggccaatgccgggggcgttgcttccacggccttacccagcccggtc
agcctgttctcgatcggcagctcgattctcgcgccgttgttccagggcggggcgctgcgc
gcgagtgcggatgcggcggccgcgcggcgcgatcaggccgcttttgcatatcgtaaaacc
gcgctgacagcctttcaggaggtcgaggatgcgctggcgggggtggtgcgcaatggcgag
gagcgggagacggccacgcggcaggttgcgtctttgcgcgccgcgctcgaccttgcccgc
cgccgttatcgagctggctattcgtcctatctcgatcagttggatgcggagcggtcgctg
cttgaggcgcagcttcagttgatcgaccttcatcgcaagcggctggcgtcggtagtggca
ttgtaccaaagcctcggtggaggctggcagcggtcagatcggtatccacaatcatag
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