Novosphingobium pentaromativorans: JI59_15885
Help
Entry
JI59_15885 CDS
T03399
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn01501
beta-Lactam resistance
npn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JI59_15885
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JI59_15885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npn02000
]
JI59_15885
01504 Antimicrobial resistance genes [BR:
npn01504
]
JI59_15885
Transporters [BR:
npn02000
]
Other transporters
Pores ion channels [TC:
1
]
JI59_15885
Antimicrobial resistance genes [BR:
npn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JI59_15885
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
JI59_15885
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
JI59_15885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AIT81159
LinkDB
All DBs
Position
3298260..3299720
Genome browser
AA seq
486 aa
AA seq
DB search
MSTILSSRVAVASMLAATFSLSACAAPDLGPRPEMRAPANLGSGRSLQSSDASAAWPREQ
WWKAYGDPQLDALVDEALANSPSVAMAEARIRQARGVAQVTGAQGLPSLGGQASAGVTKQ
TYNNGMQKGFALQGWNSTGTLALSGEFDLDLWGRARNALAAATSDEMAAMADARQAQLML
SSNVVSSYFDLARLVERGKALGEAVKAREAMVDLTEQRVRQGLENESPLHQAQAAAAQAR
VALSANQEEELLRRHALAALLGAGPDRGLEIAAPAIDAIAETPVPADAGIALAGRRPDIL
AARLRAEAAASRIDEARAAYLPDISLSGLIGLTSIGLSNLIDSGSKYGNAGGALSLPIFQ
GGRLKGQFTQARGGYDAAVANYNDTVVGALRDVADSLASREAAAQQEKDARQAREQSEAA
YDIALKRYRGGLSNYLEALTTETAALQARTSAVDAHFRTLAYEVALKRALGGGFEDNSSE
KAPDNE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgatcttatcatcacgagtcgcagtggcttccatgctggctgcgaccttttcg
ctttccgcctgcgccgcgcccgatcttggtccgcggcccgagatgcgcgcgcctgcaaat
ctcggatccgggcggtcgttgcaatcttccgatgccagcgctgcctggccgcgtgagcag
tggtggaaggcttacggcgatccgcagctcgacgcgctcgtggatgaagcgctggccaat
tcgcccagcgtcgccatggccgaggcgcgaattcgccaggcacgcggtgttgcgcaggtt
accggcgcgcaaggcttgcccagtctgggcggtcaggcctcggcaggggtgaccaagcag
acctacaacaacggcatgcagaaggggtttgcgctgcagggctggaacagcaccggtacg
ctggccttgtccggcgagttcgatctcgacttgtggggcagggcgcgcaatgcactggcc
gctgcgacttcggacgagatggcggccatggccgacgcccggcaggcgcagctgatgctt
tcgtccaatgtcgtgtcgtcctacttcgatctggcccgcctggtggaacgcggcaaggct
ctgggtgaagccgtgaaggcgcgcgaggccatggtcgacttgaccgagcagcgcgtgcgg
caagggcttgagaacgagtctccgcttcaccaggcccaggctgcggccgcgcaggcacgt
gtcgccctgtctgccaatcaggaagaggagctgctccgccgccatgcgcttgcagccttg
ctgggggctggacccgaccgtgggctcgaaatcgcagctccagcgatcgatgccattgcc
gaaacaccggttccggcagatgcgggaattgcgcttgccggcaggcgtccagatatcctc
gcggcgcgcctgcgcgccgaagcggctgcatcgcgtatcgacgaggcccgcgcagcttac
cttccggacatttcgctcagcggcctgatcggccttacctcgatcggtctttcgaacctg
atcgacagcgggtcgaaatatggcaatgccggcggcgcgctgagcctgccgatctttcag
ggcggccggctcaagggacagttcacgcaggctcgcggcggctatgacgccgcagtcgcg
aattataacgatacggtcgtcggcgcgcttcgcgacgtcgccgattcgctggccagccgc
gaggcggcggctcaacaggagaaggacgcccggcaggcgcgggaacagtccgaagccgcc
tacgatatcgcgctcaagcgctatcgtggaggtttgtcgaactacctcgaagccctgaca
accgaaactgcagcgctgcaggcgcgcacttcggcggtcgatgcccatttccggaccctt
gcttacgaagttgcgctcaagcgcgctctgggcggcgggttcgaagacaattccagtgag
aaggctcctgacaatgagtga
DBGET
integrated database retrieval system
