Novosphingobium sp. PP1Y: PP1Y_AT17956
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Entry
PP1Y_AT17956 CDS
T01515
Name
(GenBank) RND efflux system outer membrane lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp01501
beta-Lactam resistance
npp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PP1Y_AT17956
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PP1Y_AT17956
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npp02000
]
PP1Y_AT17956
01504 Antimicrobial resistance genes [BR:
npp01504
]
PP1Y_AT17956
Transporters [BR:
npp02000
]
Other transporters
Pores ion channels [TC:
1
]
PP1Y_AT17956
Antimicrobial resistance genes [BR:
npp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PP1Y_AT17956
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PP1Y_AT17956
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PP1Y_AT17956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
CCA92679
UniProt:
F6IMM7
LinkDB
All DBs
Position
1899321..1900781
Genome browser
AA seq
486 aa
AA seq
DB search
MSTTLSSRVAVASMLAVTLSLSACAAPDLGPRPQMRAPANLDSGRSLQTSATDAAWPREQ
WWKAYGDPRLDALVDEALANSPSVAMAEARIRQARGAAQVSGAQTQPQLGGRGSAGLTKQ
SYNNGVPSGFVPKGWNSTGTLALTGDFDLDLWGRARKELAAATSEEMAAQADARQAELML
SSNVVSSYFDLGRLVARGKALAEAVKARQSMVDLTGQRVEQGLDNESPLRQAQAAAAQAR
VALSANQEEELLRRHALAALLGAGPDRGLAITAPAIDSLPETPVPADAGIALAGRRPDIV
AARLRAEAAASRIDAAKAAYMPDISISGLIGLTSLGLSNLIDSGSTYGNVGGALSLPIFQ
GGRLKGQFTQARGGYDAAVANYNDTVVGALRDVADSLASRNAAAEQEKDALQAREQSAAA
YDIALKRYRGGLSNYLEALTTETAALQARTSAIDAHFRTLALEVALKRALGGGFDDNSSE
KAPDNE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgacattatcctctcgagtcgcggtggcttccatgctggctgtgaccctttcg
ctttccgcctgcgctgcgcccgatctcgggccgcggccccagatgcgcgcacccgcgaat
ctcgacagtgggcggtccctgcagacttcggcgaccgatgccgcttggccgcgtgagcag
tggtggaaagcctacggcgatccccggctcgacgcgctggtggatgaggcgctggccaat
tcgcccagtgtggccatggctgaagcgcgcattcgtcaggcgcgcggtgctgcgcaggtc
tcaggcgcgcaaacccagcctcagctcggcgggcgtggctcggccgggctgacgaagcag
agctacaacaacggcgtgccctcgggtttcgtgcccaagggctggaacagcaccggcacg
cttgcgctgaccggcgatttcgacctcgacctgtgggggagggcgcgcaaggaactcgct
gctgccacgtcggaagaaatggccgcgcaggcggacgcccggcaggcggagctgatgctt
tcgtccaatgtcgtgtcgtcctacttcgacctggggcgtcttgtcgcacggggcaaggcg
ctcgctgaagcggtcaaggcgcgccagtcgatggtggacctgaccggccagcgcgtggag
cagggcctcgataacgagtctcctttgcgccaggcgcaggccgccgcggcgcaggcgcgc
gttgcgctttcggccaaccaggaagaggaactgctgcgccgccatgcgcttgcggctctg
ctgggcgccgggccggaccgcgggcttgcgatcacggctcccgcgatcgacagcctgccg
gaaacacccgttcctgctgatgccggtatcgcccttgcaggccggcgtccggacatcgtg
gccgcgcgcttgcgcgctgaagcggcggcatcccggatcgacgcggccaaggccgcatac
atgcccgacatttcgatcagtggtttgatcggtctgacttcgctcggtctgtcgaacctg
atcgacagcgggtcgacttacggcaacgtagggggcgcgctgagcctgccgatcttccag
ggcggacgcctcaagggccagtttacgcaggcgcgcggcggttacgatgcggcagtcgcc
aactataacgacacggtcgtcggcgcgcttcgcgacgtggccgattcgctggcaagccgc
aatgcggcggccgagcaggagaaggatgccctccaggcacgagagcagtccgcggcagcc
tacgatatcgcgctcaagcggtatcgcggcggtctgtcgaactatctcgaagccctgacc
accgagactgcggccttgcaggcgcgcacctcggcgatcgatgcccatttccggaccctt
gccctcgaagtcgcgctcaagcgcgctttgggcggtgggttcgacgacaattccagtgag
aaggctcccgacaatgagtga
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