Niabella soli: NIASO_10170
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Entry
NIASO_10170 CDS
T03682
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
nso
Niabella soli
Pathway
nso01501
beta-Lactam resistance
nso02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nso00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NIASO_10170
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NIASO_10170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nso02000
]
NIASO_10170
01504 Antimicrobial resistance genes [BR:
nso01504
]
NIASO_10170
Transporters [BR:
nso02000
]
Other transporters
Pores ion channels [TC:
1
]
NIASO_10170
Antimicrobial resistance genes [BR:
nso01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NIASO_10170
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
NIASO_10170
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
NIASO_10170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AHF15423
UniProt:
W0F0S2
LinkDB
All DBs
Position
2199366..2200814
Genome browser
AA seq
482 aa
AA seq
DB search
MKIRSNPIYFSLLALSGFTIGCSVPRTTAVKQATALPQQYTAAMTDSLTAAHLTFKDFFG
DPYLTALIKKVLEHNIENRIAGEQIKIAAAYLEARKAALLPSVTAGLRGSGTHYGKYTME
GVGNFDTNLSSNIDRDQQIPTAVTPDYWLGLSTSWEIDLWGKLGSLQTAARERFLATRQG
KDLLSATLITHTATLYYELVMLDKETAILDKNIELQKKALEIIKIHKEVGRATELAVQQF
AAQLANTRATRYAVQQDITATENKLLELTGAYTGTVPRSTSMDIRSMYYLARQGHPRQLL
QYRPDIKAAYHELQASHADARAARAAFFPSVNLSATAGLQSFNITRILEPASIASGLIAG
LTAPVFQKRQLTAQFKIASTGQEIAFLSYQQTVNKAFQEVKTLLSYIDNNEKIITEKNKE
VKALNKGVEVSNDLYLTAYASYLEIIAAQKSKISADMDLLKAERDQAHALIQLYKALGGG
AG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattagatccaatcctatatacttttccttattggctttatccggctttactatc
ggctgcagtgtgcccagaactactgctgttaaacaggcaacggcgcttccgcaacagtac
acagcggcaatgaccgatagcctcacggcagcgcatttaacttttaaagatttctttggc
gatccttatctgacggcattgatcaaaaaagtactggagcataatatagaaaaccggatt
gccggtgagcagataaaaatagcggcagcctacctggaagcaagaaaagcggccctgctg
ccttccgttacagccggcctgcgcggttccggaacccattatggtaaatacaccatggag
ggagtaggcaattttgatacgaatctttcttcaaatattgacagggatcagcagatcccc
accgccgttacgcccgattactggctgggactgagcacctcctgggaaatcgatctctgg
ggaaaactgggcagcctgcaaacagccgcgcgggagcgtttcctggccacccggcaggga
aaagacctgttatcggccaccctgatcacccatacagccacgctttactatgaactggta
atgctggataaagaaacagccatcctggataagaacatcgaattgcagaaaaaggcgctt
gaaattataaagatccataaagaagtaggaagggcaacggaactggccgtacaacagttt
gccgcccaactggccaatacccgggcaacgcgttatgccgtgcaacaggacattactgcc
acagaaaataaactcctggagcttaccggcgcttacaccggtacggtgccccgcagcaca
tcaatggacatccgctctatgtactatctggcccgccaggggcatccccggcagttattg
cagtaccggccggacatcaaagccgcctaccacgaactacaggccagccatgcagatgcc
cgtgcagcccgtgcagccttttttccttcggtcaacctgtcggccacggcaggattgcaa
tcttttaacattaccaggatcctggaaccggcttctattgcatccggtttgatcgcaggc
ctgacagcgcctgttttccagaaaagacagttaacggcacaattcaaaattgccagcacc
gggcaggaaatcgcttttctgagctatcagcaaaccgtaaacaaggcctttcaggaggta
aaaaccttattgagttatatcgataacaatgaaaaaataataaccgaaaaaaataaagag
gtaaaggcccttaacaagggggttgaggtgtccaacgatctgtacttgacggcctatgcc
tcctacctggagatcattgctgcccaaaagagtaagatcagtgcagacatggacctgctt
aaagcagagcgcgaccaggcacatgccttgatacagctctataaagccctgggaggcggt
gccggttag
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