KEGG   Nicotiana tabacum (common tobacco): 107780231
Entry
107780231         CDS       T04643                                 
Name
(RefSeq) 5'-3' exoribonuclease 4-like
  KO
K20553  5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta04016  MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:nta00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    107780231
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107780231
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     107780231
SSDB
Motif
Pfam: XRN_M XRN_N zf-CCHC
Other DBs
NCBI-GeneID: 107780231
NCBI-ProteinID: XP_016456251
UniProt: A0A1S3YVC2
LinkDB
Position
Un
AA seq 603 aa
MGVPAFYRWLADRYPLSIVDVVEEEPKEDSHGLFVPVDVSKPNPNGMEFDNMYLDMNGII
HPCFHPEGKAAPATYNDVFKSIFDYIDHLFSLVRPRKLLYMAIDGVAPRAKMNQQRTRRF
RAAKDAAEAEAEEKRLREEFEMEAASLLPTGKPETSDSNVITPGTPFMAVLAVALQYYIH
SRLNKNAGWRFTKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
SLATHEVHFSILREVITPPGQQEKCFACGQVGHLAADCRGTNGNQGENGKGVNETPFHKK
KYQFLNIWVLREYLQYDLEIYNPPFRIDFERVVDDFVFLCFFVGNDFLPHMPTLEIREGA
VNLLMFIYRREFTTMGGYLTDAGEVFLDRVEHFIQAAAVYEDQIFQKRARIKQSIENNER
ARNEVNAQPQPPAEDKVKLGEPGYKERYYSEKFGVSTAEGIDEVRQDVVQKYVEGLCWVC
RYYYQGVCSWQWFYPYHYAPFASDLKGLADLEITFFPGEPFKPFDQLMGVLPAASANALP
EKYRMLMMDPSSPISDFYPTDFELDMNGKRFAWQAVVKLPFIDEKKLLAETKKLEDTLSE
EEQ
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgggagtaccagcattttataggtggttggctgatcgatacccgctatcgattgtggac
gtggtagaggaagagcctaaagaggacagtcatgggctgtttgttccagtggatgtttca
aagccgaaccctaatggcatggaatttgataacatgtacttggacatgaatggtatcatt
cacccttgttttcatcccgagggaaaggctgcaccagcaacttacaatgacgtattcaaa
tcaatttttgactacattgaccatcttttctcattagtccgtccaagaaaactcctctat
atggctattgatggagtggctcctagagctaagatgaaccagcagcgaaccaggcgtttt
agagccgctaaagatgccgctgaagctgaagctgaagaaaaaaggttgagggaagagttt
gagatggaggctgctagtttattgcctacaggaaagcctgagacatctgattcaaatgtt
attactcctggtactccatttatggcagtactagcagtagctcttcagtattatatacac
tcgaggttgaataaaaatgcaggctggcggtttaccaaggttatcctttctgatgctaat
gttcctggtgagggtgagcacaaaattatgtcctacatccgcttgcaacgtaaccttcct
ggcttcgacccaaatacccgtcattgtctttatggcctagatgcagatctgattatgctg
tctcttgctactcatgaagtccatttttcaatattgagggaggtgattacaccaccaggt
cagcaggagaagtgttttgcctgtggtcaggttggacatcttgcagctgattgtcgcggt
acaaacggaaaccaaggcgaaaatggaaagggtgtgaatgaaacaccttttcacaagaag
aaatatcagtttctcaacatctgggtgttgcgagagtatctgcaatatgatttggagatt
tacaaccctccatttcggatagactttgaaagggtggtggatgattttgtttttttgtgt
ttttttgttggaaacgattttcttccccatatgccaacactggaaattcgagagggtgcc
gtcaatctgctgatgttcatttatagaagagagtttacaacaatgggtggttatcttaca
gatgcgggtgaggtgtttttggatagagtagaacattttattcaggcggcagcagtttat
gaagaccaaatctttcaaaagagagctaggataaagcagtcaatagaaaataatgaaaga
gcaagaaatgaggttaatgctcagccacagcctccggcggaggacaaggtgaagttaggg
gagcctggatacaaggaaaggtactattccgagaaatttggtgtatcaactgcagagggt
attgatgaagtcagacaagatgtagttcagaagtatgtggaaggattgtgttgggtttgc
cggtattactaccaaggtgtttgctcgtggcaatggttttacccatatcattatgctcca
tttgcttctgacctcaaaggtctggcggacttggaaattacttttttcccaggggaacca
tttaagccctttgatcagctaatgggtgttctgccagctgcaagtgcaaatgctcttcct
gaaaagtacaggatgctaatgatggatccatcatcaccaatttctgatttttacccaaca
gattttgaacttgacatgaatggaaagcgttttgcatggcaggcagttgtaaaattgccg
ttcatcgacgagaagaagttacttgctgaaactaagaagcttgaagacacattatcggaa
gaggaacaa

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