KEGG   Nicotiana tabacum (common tobacco): 107785646
Entry
107785646         CDS       T04643                                 
Name
(RefSeq) 5'-3' exoribonuclease 3-like
  KO
K20553  5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta04016  MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:nta00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    107785646
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107785646
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     107785646
SSDB
Motif
Pfam: XRN_M XRN_N
Other DBs
NCBI-GeneID: 107785646
NCBI-ProteinID: XP_016462480
UniProt: A0A1S3ZDF2
LinkDB
Position
Un
AA seq 558 aa
MAIDGVAPRAKMNQQRARRFRAAKDAGDEASDTGRIRRNDETEREDLSTKKLDSNVITPG
TKFMELLSSALQYYIRLKVNVDSGWQGIKVILSDASVPGEGEHKIMSYIRLQRNLPGFDP
NTRHCLYGLDADLIMLALASHEVHFSILREDVRKDKSKYRGQQNRQDMYRQQAGRHSKKG
EGGGKDLENLISEQKFQFLKVWVLRDYLGYELQIPDPTVKLDLERLIDDFVFMCLFVGND
FLPHVPSLEISEGAIDLLIDVYKKEFVNMGGYLTNSCQVNLERAGHFIQAIGSYENAVFR
KRIQVQKHWGIHMQRPTLNLAVQKKQDKSNHVQAKTLSVVDKVKLGEEGWKERYYLEKFD
VQTEEDCVKIQRDVVLKYVEGICWVMHYYYQGVCSWQWFYPYHYAPFASDFHDLDRFKIH
STIGKPFKPFDQLMGVLPAASAQALPVSYRKLMTDPLSPILDFYPSDFELDMNGKRHAWQ
AVCKLPFIEESRLLSEIANVEDTLTVDEKHRNSLGLDMLFVYLSHPLATKILAFCARNKD
NPKLPKAKVKRKINPEFR
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggcgattgatggtgttgcaccacgtgccaaaatgaatcaacaacgtgcaagacgtttc
agagctgctaaagatgctggtgatgaagcctctgatacagggagaataagaaggaatgat
gaaacagaacgggaagatttaagtactaaaaagttggattcaaatgttattacacctgga
acgaaattcatggaactgctgtcatctgcacttcaatactatatacgtttgaaagtgaat
gtagactctggttggcagggaatcaaggttattctctctgatgctagtgtgcctggtgaa
ggggagcataagataatgtcttatattcgcttgcaaaggaatcttccaggatttgatcct
aatacacgacattgcttgtatggtttggacgcagacttgataatgctggcattggcgtca
catgaagttcacttttcaattctaagggaggatgtccgcaaagataaatcaaagtataga
ggtcaacagaataggcaagatatgtatagacaacaagcaggtaggcactcaaaaaaaggg
gaaggaggcggcaaggacttagagaacttaatatcagaacagaagtttcagtttcttaaa
gtatgggtactcagagattatttgggatacgaacttcaaattccagatccaactgtcaaa
ctagacctggagcgactgatagatgattttgttttcatgtgtttatttgttggaaatgat
tttcttccccacgtgccatctttggagatatcagagggagccattgacttactgattgat
gtctacaagaaggaatttgtcaatatgggtggctatcttactaattcttgccaggttaat
ttggagagggcggggcactttatacaagccattggttcttatgagaatgctgtctttagg
aagcgtatccaggtacagaagcattgggggatacacatgcaacgccctacattaaatttg
gctgttcagaagaagcaggacaaaagtaaccatgtacaagccaagaccctttctgtggtt
gataaggttaaattaggagaagagggctggaaagaaagatactatttggaaaaatttgat
gttcaaaccgaagaagattgcgtcaaaattcaaagggatgtggtcttgaaatatgttgaa
ggaatatgttgggtcatgcattattactaccaaggagtgtgctcctggcaatggttttat
ccttatcactatgctccattcgcatctgattttcatgatcttgaccgattcaaaatccac
tccacaattggcaagcccttcaagccttttgatcagctaatgggtgtccttccagctgca
agtgcacaagcacttcccgtttcttacaggaagttgatgacagatccattgtcccctatt
ttagacttctatcctagtgattttgagcttgatatgaatgggaagaggcatgcttggcag
gctgtttgtaagctgccatttattgaagagagccgtcttctatctgagattgcaaatgtt
gaagatactttaacggttgacgaaaagcacagaaacagtctcggccttgatatgttgttt
gtttacttgtcacatcctctagcaacgaagatccttgctttttgtgcaaggaacaaggac
aatccaaagttgccaaaggctaaagtgaaaaggaaaatcaatcccgagttcaggtga

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