Nicotiana tabacum (common tobacco): 107789982
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Entry
107789982 CDS
T04643
Name
(RefSeq) ABC transporter I family member 20-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107789982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107789982
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107789982
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA_29
AAA_23
AAA
Arf
Zeta_toxin
AAA_28
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
107789982
NCBI-ProteinID:
XP_016467350
UniProt:
A0A1S3ZSG6
LinkDB
All DBs
Position
Un
AA seq
328 aa
AA seq
DB search
MAVKEDRKPSVEINKLKFTYPGIDGHPPPGSTPLIEDFSLTLYPGDRCLLVGSNGAGKTT
ILKILGGKHMVEPDMVRVLGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFEVPIQMDIS
AEKMIFGVPGTDPQRRDELIKVLGIDLSWRMHKASDGQRRRVQICMGLLKPFKVLLLDEI
TVDLDVLARADLLKFLSKECEERGATIIYATHIFDGLENWPSHMLYVAHGKLQLAMPMDK
VKEISNMSLMRTVESWLRKERDEERKRRKERKAKGLPEYGKQVEGSRVVGDPARAAARPL
NNGWAGGRLNSTIAGEENFVLSSNRVLR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgaaagaagacaggaagccatcagtggagatcaacaagctcaaattcacctac
cctggtatcgatggtcacccgcctcccggatctacgcccttaatcgaagatttctcactt
accctctatcctggtgatcgctgccttcttgttggatccaatggcgcaggaaagactaca
attctgaagatattgggaggaaagcacatggtagaaccagacatggtcagagtgcttgga
agatctgcatttcatgacactgctttaacctcttctggagacctcagttatcttggcgga
gagtggaggagagaagttgcatttgctggatttgaggtgcctattcaaatggatatttct
gctgagaaaatgatttttggggttccaggaactgatccacaaagacgagatgaattaatt
aaggttcttggtattgatctatcctggagaatgcacaaagcatctgatgggcaaagaaga
agagtgcagatctgtatgggtcttctgaaaccattcaaggttcttcttcttgacgagatt
acagttgacctagatgttctagcgagggctgatcttttgaaatttctgagcaaagaatgt
gaagagcgaggcgctacaataatttatgcaacacacatttttgatggtcttgagaattgg
ccttctcatatgctatacgtggctcatgggaagttgcaattagcaatgccaatggacaag
gtaaaggagatcagcaatatgtcattaatgaggacagtagagagttggctgaggaaagaa
agagacgaggagaggaaaagaaggaaagagagaaaggcaaagggccttccagagtatgga
aaacaagttgagggcagtcgagtggttggggatccagctcgtgctgctgctcgtccgtta
aacaacggttgggctggtggaaggctaaattctactattgctggtgaagaaaattttgtc
ttaagctcaaaccgtgttctaagataa
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