KEGG   Nicotiana tabacum (common tobacco): 107794854
Entry
107794854         CDS       T04643                                 
Name
(RefSeq) DNA-directed RNA polymerase IV subunit 1-like
  KO
K16250  DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107794854
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nta03021]
    107794854
Enzymes [BR:nta01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     107794854
Transcription machinery [BR:nta03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     107794854
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5 RNA_pol_Rpb1_4 RNA_pol_Rpb1_1
Other DBs
NCBI-GeneID: 107794854
NCBI-ProteinID: XP_016472881
UniProt: A0A1S4A8H2
LinkDB
Position
Un
AA seq 1495 aa
MEHDLIEQQVPSGTLKGIIFNILSETDAAKLAAKVIGVVNEVTDPALGFPNPIFECSTCG
AKDGKKCEGHFGLINFPFTILNPYFISEVAKILNKVCPGCKSVRRDKVKVRCAIFQKKKF
QAIMVVGTSHSTHRYCCCSFCSQGESSLLCLFQGADTTSACNYCDGILRGYPPMKFKVSP
KDMFGRTAIIAEVSEKKLQQTSGGSLASDYWNFIPDDAQQDASLNSSKYKKVLTHAQVTK
FLKINFFGEVKLLVAVFRFMIYFMWLNGKKDESCWGWGXEFGQHMIFDESNRLYRKLIDF
RGTANDLSMCVFNRIKVSKIRAERSLTNDPNAPATGLKYVKELVLAKRTNHAFRMVVVGD
PNIKLGEIGIPCHVAEDLHMAEPLSSRNWEKLTDHCDLMILQKGAIHVRRNGVLVRISVM
DQLQRGDIIYRPLIDGDVVLINRPPSIHQHSLIALSVRILPIISVLSINPLVCSPFRGDF
DGDCLHGYVPQSIDSRVELSELVGLNRQLIDGQSGQNLLSLSHDSLTAAHLILEEGVFLD
RFQMQQLQMFCPHQVGMPAIVRAPSRNRSYWTGKQLFGLFLPSDLDCDFPSNGVCISDGE
IVTSSGGSSWLRDASEDLFYSLVKHHGGDTLDLLYAAQAVLCEWLSMRGLSVSLSDLYIS
SDPYSRENMIDEVFCGLQEAERLSYVQLLMTRYNHDFLAGSLEVSQKAMGFDLEFMSIML
QKSASLSQASVTAFKQVFRDIQNLVYNYASKENSFLAMLKAGSKGNLLKLVQHSMCLGLQ
QSLVPLSFRMPRQLSCDAWNNHKAHLPFEKAHNVPERPGSYIPCAVVENSFLAGLNPLEC
FVHSLTTRDSSFSGHADVSGTLNRKLMFFMRDLYIGYDGTVRNAYGNQIVQFSYYNTDQI
ASTYNRASHAIGGHPVGSLAACAISEAAYSALDLPIGALEPSPLLNLKKILEAGVKSNSS
EKTASLFLSKRLGRWAHGFEYGALEVKGHLERLLLSDIVSTVMICFSPGTYKSTHSSPWV
CHFHIDKEYVKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKDCSVAEMQKANSK
ICIAVAVVETSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGS
TGELYLQVFMSESCDRNNFWNALVDSCLHIMDLIDWEWSHPDNVHDLTVAYGVDVAWKYF
LRNLNSAVSETGKKILPEHLVLAADCLTATGEFVPLNTKGLAQQRKCAGVISPFMQACFS
HPGDSFVRAAKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIYSGKGYEPAAPTDVYALL
GNHVTSNKQQVKVTLDEDNETADKALARRLCKLDDLNTKRCKSQWSIANLRSFLSFNGIK
KLSQALKQMLSKYAIDRELSEADKSIVMMALHFHPRRSEKIGKGAMEIKIGYHKEYEDSR
CFMLVRTDGTVEDFSYRKCLQHALELIAPQKAKTYKWLNGASCGPTASTLQNEVK
NT seq 4488 nt   +upstreamnt  +downstreamnt
atggagcatgatcttattgagcagcaagtgccttcaggtactctgaagggcataattttc
aatatcttatcggagactgatgcagccaaattggcagctaaggttattggagtagtgaat
gaagtaacagatcctgcattggggtttccgaatccaatctttgagtgctccacctgtggt
gcaaaagatgggaaaaaatgtgaaggtcattttggactaataaacttcccgttcacaata
ctcaatccttatttcatatcagaggttgcaaagatcctgaacaaagtatgtccgggatgt
aaatctgtgcggcgtgataaggtcaaggtcagatgcgctatttttcaaaaaaagaaattc
caagctattatggtagttggtacttcacattcgacacatcgatattgctgctgttctttt
tgctcccagggtgaaagttctttgctttgccttttccagggtgctgatacgacatctgcc
tgcaattactgtgatggaattttaagaggttatccaccaatgaaatttaaagtatctcct
aaagacatgtttggaaggactgccattattgcagaagtgagcgaaaagaagcttcagcaa
acttctggaggaagtttggcttctgactattggaattttatcccagatgatgcacaacaa
gatgcaagtttaaattcttcaaagtacaaaaaagttttaacacatgctcaggtaacaaaa
tttcttaagattaatttttttggggaggtaaaacttctagttgctgtttttcgtttcatg
atatattttatgtggttaaatggaaaaaaagatgagagttgttgggggtggggttncgaa
tttgggcagcacatgatatttgatgagagtaataggctttacagaaagctgattgacttc
agagggacagcaaatgacttgagcatgtgtgtttttaatagaattaaagtttccaagata
cgtgcagagaggtcactaaccaacgatcctaatgcccctgctactggtttgaagtatgtg
aaagaactggttctggcaaaacgcactaaccatgctttccgcatggttgtggttggtgat
cccaacataaagctaggtgagattggtattccgtgtcatgttgcagaggatctccatatg
gcggaacccctaagttcacggaattgggaaaagttgactgatcactgtgatcttatgatt
cttcagaagggagcgattcacgttcgtagaaatggtgtcttagttcgtattagtgtaatg
gatcagttgcagagaggggatataatatatagacctctaattgatggagatgttgtgttg
ataaatcgacctccatctattcatcaacactcactaattgctctgtctgttaggattctt
ccaataatttctgttctttcaatcaatcctcttgtgtgttctccattccgtggggatttt
gatggtgattgccttcatggttatgttccgcaatcaatcgattctagggttgagcttagt
gagcttgttggtctgaatcggcagcttattgatggacagagtggtcaaaatcttctttcg
ttaagtcatgacagcttaactgctgctcatttaattttggaagaaggagttttcttggac
cgctttcagatgcagcagctacaaatgttttgtcctcatcaagtggggatgcctgctatt
gtacgagcaccatcaagaaacaggagttattggactgggaaacagttattcggcttgttt
ttgccatcagaccttgactgtgattttccatcaaatggcgtctgtattagtgatggggag
attgtgacatcttctggtgggtcgtcttggctgcgtgatgccagtgaagatctcttttat
agtcttgttaaacaccatggaggtgacactcttgacctcctttatgctgcacaagcagtt
ctttgtgagtggttgtcaatgaggggtcttagtgtttcattgtccgatctttacatctct
tctgatccatattcccgagaaaatatgattgatgaagtcttttgtggtttgcaagaggca
gagcgactatcttatgtccaactgctgatgacgaggtataatcacgatttccttgctgga
agcctagaagtaagccagaaagccatgggttttgatttggagtttatgtctatcatgctg
cagaagtcagcttctctgagtcaagcttctgttactgctttcaagcaagttttccgggat
atccagaatttagtatataattatgcaagcaaggagaattcgtttctggctatgttaaaa
gctgggagtaagggcaacctgctaaaactggtccaacacagcatgtgtcttggtttgcag
cagtctttggttccgttatcatttagaatgccgcgtcaactttcttgtgatgcatggaat
aatcataaagcacatcttccttttgagaaagctcataatgttcctgaacgtcctggttct
tacatcccgtgtgctgtggttgagaattcatttcttgcgggtttgaatcctctagagtgt
tttgtgcattcattgacaacccgtgatagttcttttagtggacatgctgatgtttctgga
acattgaaccgtaagcttatgtttttcatgcgtgatctgtacattggatatgatggaaca
gtgagaaatgcttatgggaatcaaattgtgcagttctcttactacaacacagaccaaatt
gcttctacatataaccgtgcttctcatgcaattggtggccatcctgttggttcattggca
gcctgtgccatttctgaagctgcatacagtgctttggatctacctatcggtgcacttgag
ccatcacctttactcaacctaaagaaaatactggaagctggagtaaagagtaatagtagc
gagaaaactgcatctctgtttctttcgaaaagacttggcagatgggctcatggttttgaa
tatggagctttagaggtcaagggtcatctagaaaggcttcttctttcagatattgtttcg
accgtaatgatatgcttctcccctggaacatataaaagcactcacagtagtccctgggtt
tgtcattttcatatagataaggaatatgtgaagacaagaaggctgaagctgaaatcagta
atagatgctcttaacatgagatatcgatcaactagaatggaagctggaatagatcttcca
agcctgcatataacatgcaaggattgttccgtcgctgaaatgcaaaaagcgaattccaaa
atttgcattgcagttgctgtggttgagacctcaaaagattctttttcactactggataca
cttcgtgatttggtgattccattccttcttgagactgtgatcaaaggtttctccgcattt
aaaaaagttgatatcttatggagagagttgccaagtacatcaaaatcttccagaggctct
accggggaactatatttgcaggtctttatgtcagaaagttgtgatcggaacaacttttgg
aatgcacttgtggatagttgcctccatataatggatttgattgattgggagtggagtcat
cccgataacgtccatgatctgactgtagcctatggagttgatgtagcatggaagtacttt
ctacgtaatctgaattctgccgtctctgaaactggcaagaaaatccttccggaacacttg
gtacttgcagcagattgtctcacagctacaggggaatttgttccgttgaatacaaaaggt
ctggcgcagcaaagaaagtgtgctggtgttatttcaccatttatgcaagcctgcttttcg
catcccggggactcttttgttagggctgccaagacagaattaagtgatgatcttcaagga
agtctggaagcattggcgtggggaaaaaccccttccacagggactggtttttcattcgac
attatctattctggaaagggatatgagcctgctgcaccaacagatgtgtatgctctgctg
ggcaaccatgtcacatcaaataagcaacaggtgaaggtcactcttgacgaagacaatgaa
acggctgacaaggctcttgcacgacgtctttgtaaacttgatgatctcaatacaaagaga
tgtaaaagccagtggtcaattgcaaatttgagaagtttcctttcattcaacggcataaag
aagctctctcaggcattgaagcaaatgctgtccaaatatgctattgatcgcgagttaagt
gaagcagacaagtccatagtaatgatggcattgcattttcatcccagaaggagtgagaag
atcggaaaaggagcaatggaaataaagattggttaccacaaagaatatgaagattcccgc
tgctttatgttggtacgtacagatggaacagttgaagacttctcgtatcgtaagtgtcta
caacatgctctggaactgatcgctcctcaaaaggcaaaaacctataaatggttgaatgga
gcatcatgtggtcccactgcctcaaccttgcaaaatgaggtcaagtaa

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