KEGG   Nicotiana tabacum (common tobacco): 107808663
Entry
107808663         CDS       T04643                                 
Name
(RefSeq) 5'-3' exoribonuclease 4-like
  KO
K20553  5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta04016  MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:nta00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    107808663
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107808663
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     107808663
SSDB
Motif
Pfam: XRN_M XRN_N zf-CCHC
Other DBs
NCBI-GeneID: 107808663
NCBI-ProteinID: XP_016488688
UniProt: A0A1S4BII1
LinkDB
Position
Un
AA seq 949 aa
DSDNLLQLLGISPRFSSVFPIVRYYLYIRVFFSTLQPAPATYDDVFKSIFVYIDHLFSLV
RPRKLLYMAIDGVAPRAKMNQQRTRRFRAAKDAAEAEAEEKRLREEFEMEAASLLPTGKP
ETSDSNVITPGTPFMAVLAVALQYYIQSRLNKNAGWRFTKVILSDANVPGEGEHKIMSYI
RLQRNLPGFDPNTRHCLYGLDADLIMLSLATHEVHFSILREVITSPGQQEKCFACGQVGH
LAADCRGTNGNQGEDGKGVNETPIHKKKYQFLNIWVLREYLQYDLEIYNPPFRIDFERVV
DDFVFLCFFVGNDFLPHMPTLEIREGAINLLMCIYRREFTTMGGYLTDAGEVFLDRVEHF
IQAAAVYEDQIFQKRARIKQSIENNERARNEVNAQPQPPAEDKVKLGEPGYKERYYSEKF
GVSTAEGIDEVRQDVVQKYVEGLCWVCRYYYQGVCSWQWFYPYHYAPFASDLKGLADLEI
TFFPGEPFKPFDQLMGVLPAASANALPEKYRMLMMDPSSPISDFYPTDFELDMNGKRFAW
QAVVKLPFIDEKKLVAETKKLEDTLSEEEQLRNSVMFDLLYVHHHHTLAPYIISYYHHNN
KVPPGEQRPWLIDANLSGGMNGFIWLSERNGLRDRVCSPLNGLEDISNNKILNITFLNPV
LHKHIPKPPEGVYMPKKILRAVDIKPFPVLWHEDHGTRRQLGKDRGPVPGAIAGPSLGEA
AHRLLKNTLNIKPGGTNSGVLEQSYPRNFLGNHVLNRPRPAGPSGYEGGFYDQMSYRNFS
PNHRPRFPGPVGRANGFFEDPSYLSSNFMPRGASGNPRYAPSPYELQSPRQNFRMQDRHS
YQDQYHSMRNEMSVLTIESGSRTRPYSAVPRMPNSGQLSNVRPPPFTPSVGPLPSPPPQW
INKPARGTTSMHLKHQETLKGPGYEKQVKQVYQIKSRPTQSPQETGTQH
NT seq 2850 nt   +upstreamnt  +downstreamnt
gattctgataatttgttgcaattacttggtatatctccccgtttctctagtgtttttcct
atagttaggtactacctttatatcagagttttcttctccaccttgcagcctgcaccagca
acttacgatgacgtattcaaatcaatttttgtctacattgaccatcttttctcattagtc
cgtccaagaaaactcctctatatggctattgatggagtggctcctagagctaagatgaac
cagcagcgaaccaggcgttttagagccgctaaagatgccgctgaagctgaagctgaagaa
aaaaggttgagggaagagtttgagatggaggctgctagtttattgcctacaggaaagcct
gagacatctgattcaaatgttattactcctggtactccatttatggcagtactagcagta
gctcttcagtattatatacaatcgaggttgaataaaaatgcaggctggcggtttaccaag
gttatcctttctgatgctaatgttcctggtgagggtgaacacaaaattatgtcctacatc
cgcttgcaacgtaaccttcctggcttcgacccaaatacccgtcattgtctttatggccta
gatgcagatctgattatgttgtctcttgctactcatgaagtccatttttcaatattgagg
gaggtgattacatcaccaggtcagcaggagaagtgttttgcctgtggtcaggttggacat
cttgcagctgattgtcgcggtacaaacggaaaccaaggcgaagatggaaagggtgtgaat
gaaacacctattcacaagaagaaatatcagtttctcaacatctgggtgttgcgagagtat
ctgcaatatgatttggagatttacaaccctccatttcggatagactttgaaagggtggtg
gatgattttgtttttttgtgtttttttgttggaaacgattttcttccccatatgccaaca
ctggagattcgagagggtgccatcaatctgctgatgtgcatctatagaagagagtttaca
acaatgggtggttatcttacagatgcgggtgaggtgtttttggatagagtagaacatttt
attcaggcggcagcagtttatgaagaccaaatctttcaaaagagagctaggataaagcag
tcaatagaaaataatgaaagagcaagaaatgaggttaatgctcagccacagcctccggcg
gaggacaaggtgaagttaggggagcctggatacaaggaaaggtactattccgagaaattt
ggtgtatcaactgcagagggtattgatgaagtcagacaagatgtagttcagaagtatgtg
gaaggattatgttgggtttgccggtattactaccaaggtgtttgctcgtggcaatggttt
tacccatatcattatgctccatttgcttctgacctcaaaggtctggcggacttggaaatt
actttcttcccaggggaaccatttaagccctttgatcagctaatgggtgttctgccagct
gcaagtgcaaatgctcttcctgaaaagtacaggatgctaatgatggatccatcatcgcca
atttctgatttttacccaacagattttgaacttgacatgaatggaaagcgttttgcatgg
caggctgttgtaaaattgccgttcatcgacgagaagaagttagttgctgaaactaaaaag
cttgaagacacgttgtcggaagaggagcaactcaggaacagtgtaatgttcgatttgctc
tatgttcatcatcaccatactttggctccatatatcatttcgtactatcatcacaataat
aaggtgcccccaggggaacaaaggccatggctaattgatgcaaatctgagtggtggaatg
aatggattcatttggttatctgagcggaatggcctgagagatagggtttgttccccactc
aatggattggaagatatttcaaataataagattttaaatattacctttctgaatccagta
cttcataagcatattccgaagcctccagaaggagtatatatgcccaaaaagattttgaga
gctgttgatataaaacctttccctgtattatggcatgaagatcatggtacccggcgtcag
ctgggcaaagataggggtccagtacctggggctatagcagggccttctctgggagaagca
gcacatcggttgcttaagaacacattgaatatcaaacccggtggaacaaattctggagtg
ttggagcaatcatatcctcgaaatttcctcggcaaccatgttctgaatagaccaaggcca
gctggaccgtctggctatgaaggtggattttatgatcaaatgagttacaggaatttttct
cccaatcaccgcccacgatttccaggaccagttggccgcgcaaatggtttttttgaggat
ccttcttatttatctagcaattttatgcctcgtggtgcatctggaaatcccagatatgct
ccatccccttatgagttgcaaagccctaggcaaaatttcaggatgcaagacaggcattca
tatcaagatcagtatcatagcatgaggaatgaaatgtctgtgttgacaattgaaagtggt
tcaagaacgaggccttattcagctgtgccaaggatgccaaattcaggacaactttctaac
gtccgcccaccgccattcacaccaagtgtgggtccacttccttcacccccgccgcagtgg
attaataaacctgcaaggggaactacatcaatgcacttaaagcatcaagagactttaaaa
gggccggggtacgagaagcaagtcaagcaggtttaccaaatcaaaagccgaccaactcag
agtccccaagaaacaggaacacaacattaa

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