Nicotiana tabacum (common tobacco): 107813735
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Entry
107813735 CDS
T04643
Name
(RefSeq) ABC transporter I family member 19-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107813735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107813735
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107813735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
nSTAND3
AAA_29
ORC-CDC6-like
AAA_15
AAA_28
SMC_N
NACHT
AAA
AAA_22
AAA_23
AAA_18
AAA_5
AAA_25
AAA_24
AAA_30
AAA_16
AAA_33
SRP54
AAA_7
PduV-EutP
AAA_14
Zeta_toxin
DUF3584
FtsK_SpoIIIE
Arf
AAA_13
Motif
Other DBs
NCBI-GeneID:
107813735
NCBI-ProteinID:
XP_016494520
UniProt:
A0A1S4C044
LinkDB
All DBs
Position
Un
AA seq
286 aa
AA seq
DB search
MEGESNSIQVDGMQFSYDFQSPIFFDFSLKISPGSRCLLVGANGSGKTTLLRILAGKHMV
GGRDVVKVLNFSAFHDTHLVCDGDLAYLGESWSKNVGSAGEIPLQGDFSAEHMIFGVEGV
DPVRREKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEVTVDLDVVARMD
LLDFFKEECEQRGATIVYATHIFDGLESWATDLVYIQDGVLKRSEKLPELPELKSSPNLL
SVVENWLRSETTIEKKKPVIAPPKVQKSSPFGSSPFQSSRHMAYFR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaatcaaacagtattcaagtcgatggaatgcaattctcttacgatttccaa
agtcctatctttttcgatttcagcctaaagatttctcccggatctcgatgtctccttgtc
ggtgcaaatggatccgggaagacgacattgttgaggatattggcgggaaagcatatggtg
ggaggaagagatgtagtgaaggtgctgaatttttcggcatttcatgacacccaccttgtc
tgtgatggtgatctggcatacctaggagagtcatggagcaaaaatgttggctctgctggg
gagattccacttcagggagatttttcagcagaacatatgatatttggagtcgaaggagtc
gatccagttcggcgagagaagttgattgagctgctggatattgatctgcaatggcgtatg
cacaaggtatctgatggtcagagacgcagagttcaaatctgcatgggtctccttcacccc
tataaggttcttttgctggatgaggttacagttgacttagatgttgtcgcaaggatggat
ttgttggacttctttaaggaagaatgcgaacagagaggagctactattgtctatgcaaca
catatatttgatggactggagtcctgggcaacagatcttgtttacatccaagatggagtt
ctgaagaggtctgagaaattacccgagcttcccgagttgaagtcttcccccaatttgctt
tcagtagttgagaactggttgaggtctgagaccacgattgagaaaaagaagccggttatc
gccccaccaaaagttcagaaatcctctccttttggctcttctccgtttcagtcatctaga
catatggcatatttccgctga
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