Nicotiana tabacum (common tobacco): 107825164
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Entry
107825164 CDS
T04643
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B'-like
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107825164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107825164
03041 Spliceosome [BR:
nta03041
]
107825164
03032 DNA replication proteins [BR:
nta03032
]
107825164
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
107825164
Spliceosome [BR:
nta03041
]
Complex A
U1 snRNP components
Sm proteins
107825164
U2 snRNP components
107825164
Complex B
U1 snRNP components
107825164
U4/U6.U5 tri-snRNP components
107825164
Complex C
U2 snRNP components
107825164
DNA replication proteins [BR:
nta03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
107825164
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
107825164
NCBI-ProteinID:
XP_016507478
UniProt:
A0A1S4D2C9
LinkDB
All DBs
Position
Un
AA seq
273 aa
AA seq
DB search
MSMSKSSKMLQYINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPTKGSKEE
REDRRTLGLVLLRGEEVISMTVEGPPPPDESRVKSTAAGSAVPGPGLGRAAGRGVPTGPL
VHAQPGLAGPVRGVGGPAPGMMQPQISRPPMPNVSAPPMNYPPPVMRPPGGGPPMQMQMQ
RPGGPPPPMAPPPQFRPGGGPPQFPPQFGQRPMVPPPPMMRGPPPPGAPPRPGMPGGPPG
QPPRPGMPPPPPGGQVPVYGPPRPGMPPPPNQQ
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcaaagagttccaaaatgcttcaatacatcaattaccgtatgcgtgtaaca
atccaagacggccgtcaattgatcggaaaattcatggctttcgaccgacacatgaacctc
gtgctcggagactgtgaagagttccgcaaactccctccgacaaaaggatccaaagaagaa
cgtgaagatcggcgtacacttggtcttgtacttctccgtggtgaagaggttatttccatg
actgttgagggcccacctcctcccgatgaatcccgggtcaagtctactgctgctggttct
gctgtacctggcccggggctcggtcgggctgctggtcgtggtgttcctaccgggccttta
gttcatgctcagcctggacttgctgggcctgttcgtggtgttggtgggcctgctcctggt
atgatgcagcctcaaatttctcggcctccgatgccgaatgtctctgctcccccaatgaat
tacccgccgccggtgatgaggccgcctggtggtggcccaccaatgcaaatgcagatgcag
agacctgggggcccaccaccgcctatggcgccaccaccacagttcaggcctggtggtggc
ccaccacagttcccgccgcagtttggtcagcggccaatggttccgccgcctcccatgatg
aggggcccacctccacctggtgctccacctagaccaggaatgcctggtggtcctcctggt
caaccgcctcgcccgggtatgccacccccgcctcctggcggtcaggttcctgtttatgga
cctcctcgtcctggtatgcctccaccacctaatcagcagtaa
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integrated database retrieval system
