Nitrospira tepida: DNFV4_01963
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Entry
DNFV4_01963 CDS
T09383
Name
(GenBank) putative outer membrane protein TolC
KO
K12340
outer membrane protein
Organism
nti
Nitrospira tepida
Pathway
nti01501
beta-Lactam resistance
nti01503
Cationic antimicrobial peptide (CAMP) resistance
nti02020
Two-component system
nti03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DNFV4_01963
09132 Signal transduction
02020 Two-component system
DNFV4_01963
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DNFV4_01963
01503 Cationic antimicrobial peptide (CAMP) resistance
DNFV4_01963
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nti02000
]
DNFV4_01963
02044 Secretion system [BR:
nti02044
]
DNFV4_01963
01504 Antimicrobial resistance genes [BR:
nti01504
]
DNFV4_01963
Transporters [BR:
nti02000
]
Other transporters
Pores ion channels [TC:
1
]
DNFV4_01963
Secretion system [BR:
nti02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
DNFV4_01963
RTX toxin transporter
DNFV4_01963
Multiple protein transporter
DNFV4_01963
RaxAB-RaxC type I secretion system protein
DNFV4_01963
Antimicrobial resistance genes [BR:
nti01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
DNFV4_01963
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
DNFV4_01963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Ribosomal_L27_C
Motif
Other DBs
NCBI-ProteinID:
CAI4031543
UniProt:
A0AA86T3W4
LinkDB
All DBs
Position
NsDNF:complement(2003119..2004480)
Genome browser
AA seq
453 aa
AA seq
DB search
MNPDSTSAFRHLSFTLCAFLLTAGMAFGQEEVLLKGTFLALRQAVEIGLKQHPAVQEAQA
QVKAADARIKQAQSLYYPQVYANANTVAGAGRTNPRFLIGGGLLQENQSTFAGGLIANQR
IYDFGFTQNMVESSKLAAEAQGQDLQARRSLIMLTVQRAYFNSLKRQRLVQIAEETVRER
GTITGQIGALYRQQLKSKLDLNLAQVELTNAESQLVRARNDLKASFVELNRAMGIQGLDD
YVLEDLPVAIRDLPPLPALLQDSLTHPELRRAKEFTASAEAKLVATKRQYLPTISAIASG
GTFDPFDPRQAQQTGGWWTAGALVSMPLFTGFLIENQVREAGAQQAAAQAASANVEQALS
QQVTTSYLETLTLAQQIRLAEEQVRTAQEALQLSQQRYKLGLGTVVEVTQAEVAVAAAKT
RLAESQYDYVISQATLAYAAGLITADRPDEVLR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgattcaacttcagcctttcggcacctctcgttcacgctctgtgccttcctg
ttgaccgccggcatggcgttcggacaggaggaagttctcctgaagggaacatttctcgcc
ctgcggcaggccgtcgaaataggcctgaagcaacatcccgccgttcaggaagcccaggcg
caggtcaaggccgcggacgcccggatcaagcaggcgcaatcgctctactacccgcaggtc
tatgccaacgccaacaccgtcgcgggggccgggcggaccaatccgcggttcctcatcggc
ggaggattgttgcaggagaaccagtccacgtttgccggcggcctgatcgccaaccaacgg
atttacgacttcggcttcacgcaaaacatggtggaatcctccaaactcgcagccgaggcg
cagggacaggacctgcaagcgcgccgctcgctcattatgctgaccgtgcaacgggcctac
ttcaacagcctcaagcggcaacggctcgtgcaaattgcggaggaaaccgtccgggagcgg
ggcacgatcaccggccagatcggagccctctatcggcaacagctcaagtccaagctcgac
ctcaatctggcgcaggtcgaattgacgaacgccgaatcgcagctcgtgcgggcccgcaat
gacttgaaggccagtttcgtcgagttgaaccgcgcgatgggcattcaaggcctggatgat
tacgtgctggaggatctcccggtcgccatccgcgacctgcctccgcttcccgctctccta
caggacagcctgacccatccggaattgcggcgcgccaaggagttcacggcttcggccgag
gccaagctcgtcgcgaccaaacggcaataccttccgacaatctccgccattgccagcggc
ggcacgttcgatccctttgatccaaggcaagcccagcagaccggggggtggtggacggcg
ggggccctggtgtccatgccgctgttcacgggcttcctcatcgaaaaccaggtgcgggaa
gccggcgcccaacaggcggcggcgcaggcggccagcgccaacgtcgagcaggcgctgagc
cagcaggtgacgacttcctacctcgaaacgctgacgctcgcccagcagatccgactcgcg
gaggagcaggtccggacggcgcaggaggcgttgcaattgtcgcagcagcggtacaagttg
ggcctgggcaccgtcgtcgaagtgacgcaggccgaagtcgcggtggcggccgccaagacg
cgcctcgcggagtcgcaatacgactatgtgatttcccaggcgaccctggcctatgcggcg
ggactcatcacggccgaccgtccggatgaagtgctgcggtag
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