Nitrospira tepida: DNFV4_02507
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Entry
DNFV4_02507 CDS
T09383
Name
(GenBank) RND efflux system, outer membrane factor lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
nti
Nitrospira tepida
Pathway
nti01501
beta-Lactam resistance
nti02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DNFV4_02507
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DNFV4_02507
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nti02000
]
DNFV4_02507
01504 Antimicrobial resistance genes [BR:
nti01504
]
DNFV4_02507
Transporters [BR:
nti02000
]
Other transporters
Pores ion channels [TC:
1
]
DNFV4_02507
Antimicrobial resistance genes [BR:
nti01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DNFV4_02507
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DNFV4_02507
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DNFV4_02507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
CAI4032082
UniProt:
A0AA86MZW1
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All DBs
Position
NsDNF:complement(2550376..2551866)
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AA seq
496 aa
AA seq
DB search
MNRWLVALALVMPMAACKMGPDYVRPESHEADEWRLAPATSESIANLPWWELLRDPELQR
LIQTALQENQDLRTAVASVEEVQAQLVIARFDLAPSLGYEGRAFVFKTERDTLALPSGGT
GGITIPSQVGQGGTLSNANAFAGLKWELDLWGRIRRSIESAHAVLASREEAKRAIVLSLV
GNVAEAYFDLRQLDLQVEITKRTLKTWEDTVRLSRIKLEQGVIPKLDLDRFEAERAYAAA
QLADLERQVVQKENQFSVLLGRKPARIARGLGLTEQSLPPAVPAGLPSDLLRRRPDILQA
EQEWVSATAQIGVAEALRFPQFSLTGALGVANTQLSGFAPGATFAQTAGVSVAGPLLNAT
ALGYQVKVAEARARQAAAQYDRTVVTAFKEVEDALIAVQKSRQQREAQEAQVLSLQSALE
MADLRYRGGRASYLDVLTAQRTLFDAELALARTRRNQLTAVVQLYKAVGGGWSPDDVAPT
QANLSTVSRPERVSKD
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgatggctagtcgcactcgcgctcgtgatgcccatggcggcctgcaaaatgggt
ccggattatgtcaggccggaaagtcacgaggcggatgaatggcgtctggctcccgccacc
tcggaatcgatcgccaacctgccctggtgggagttgctcagggacccggaactccaacgg
ctgatccagaccgcgttacaggagaaccaggaccttcgaacggcggtcgccagcgtcgaa
gaggtccaggcgcagctcgtgatcgctcggttcgatctggcgccgtcgctcggatacgaa
gggcgggcctttgtgttcaagacagaacgcgatacgcttgccttgccctcgggagggacg
ggagggatcacgatcccgagccaggtagggcaaggaggcacgctctcgaatgcgaatgcc
ttcgcaggcctgaaatgggagctggacctgtggggacgtatccgccggtcgatcgaatcg
gcgcacgcggtcttggcctcccgcgaagaggcgaaacgggccatcgtgctcagcttggtc
ggcaatgtcgccgaggcctacttcgacctccgccaactggaccttcaagtcgaaattacc
aagcggaccctgaagacctgggaggacacggtcaggctgtcccgaatcaaattggagcag
ggggtgattcccaagcttgatctcgaccggtttgaggctgaacgggcctatgccgcggcg
caattggcggatcttgagcgccaggtcgttcaaaaggagaatcagtttagtgtgcttctg
ggacggaagcccgcccgcatcgcgcgcgggcttgggctcaccgagcagagcctgccgccg
gcagtcccggcgggcttaccgtccgatctgttgcggcggcggccggatatcctgcaggcc
gaacaggagtgggtttcggcgacggcccagatcggggttgccgaggccttgcgctttcca
cagttttctctgacgggcgcgctcggggtggccaacacccagttgtccggctttgcgccc
ggggcgaccttcgcccagaccgccggggtttccgtcgccggtccgttgctgaacgcgacc
gctctcggttaccaggttaaggtggcggaagctcgagccagacaagcggcggcacagtat
gacaggaccgtcgtcacggcattcaaggaagtagaggacgcgctgattgcggtccagaag
tcccggcaacagcgggaggcgcaggaagcccaggtcctctcgctacagtcggctctcgaa
atggccgatctgcgctatcgagggggccgcgcaagctatctcgacgtcctgacggcccag
cggacgctgtttgatgcggaacttgcgctggccagaacgagacggaatcaattgaccgcc
gttgtgcagttgtataaagctgtggggggaggctggtcgcctgatgacgtcgctccgact
caggcgaacctgtccaccgtctcccgtcccgagcgggtgagcaaggactaa
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