Niabella yanshanensis: U0035_08640
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Entry
U0035_08640 CDS
T09723
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
nyn
Niabella yanshanensis
Pathway
nyn01501
beta-Lactam resistance
nyn01503
Cationic antimicrobial peptide (CAMP) resistance
nyn02020
Two-component system
nyn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nyn00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
U0035_08640
09132 Signal transduction
02020 Two-component system
U0035_08640
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U0035_08640
01503 Cationic antimicrobial peptide (CAMP) resistance
U0035_08640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nyn02000
]
U0035_08640
02044 Secretion system [BR:
nyn02044
]
U0035_08640
01504 Antimicrobial resistance genes [BR:
nyn01504
]
U0035_08640
Transporters [BR:
nyn02000
]
Other transporters
Pores ion channels [TC:
1
]
U0035_08640
Secretion system [BR:
nyn02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
U0035_08640
RTX toxin transporter
U0035_08640
Multiple protein transporter
U0035_08640
RaxAB-RaxC type I secretion system protein
U0035_08640
Antimicrobial resistance genes [BR:
nyn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
U0035_08640
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
U0035_08640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WQD40210
LinkDB
All DBs
Position
complement(2149657..2151006)
Genome browser
AA seq
449 aa
AA seq
DB search
MTLCFEKWKRRIGLTITGLSCFLGVHLNAQSQTGDTTLQRATLAGIIDYALTHQPGVRQA
EINQEITDLQIKNRLADWYPQVNFNYNYQRNFQLPVNIIGGNQVRFGVFNTSALQFTATQ
NIFNRDALLASRTKGDVRLVAAKQTENARINLVANVSKNFYDLLATDQQRKITDENIAML
SRSLRDARARFDAGVTDKTDYQRATIALNNAMASKKEIEEALNAKEANLKFLINYPGDKE
LSLMYDSATLEQEIFLDTLQAPAYTRRVEYQQLQAQLRLQEANVRYNKWSYIPTVSANGA
YIRNFLNDDFAKLFNQSFPNSYAGLTVGFPIFQGGKRKNNIVIAERQVEQTRLDLINFSN
QASSEYKTAMAQYRASMANYQALKENMELAKEVHRIIELQYREGIKTYLELITAQTDLRA
SQINYFNAVYGLLSSKIDVQRAEGSIQPK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgactctttgttttgagaaatggaaacgccggatcggtttaactataaccggcctctcc
tgttttttgggtgttcatttaaatgcccagtcgcaaactggtgacaccaccttacaacgg
gcaaccctggcaggtattatcgattatgcattaacccatcaaccgggtgtcaggcaggct
gagatcaaccaggaaattactgacctgcagataaaaaatcgcttggcagactggtatccc
caggtgaacttcaactataattaccagcgtaattttcagttacctgttaatattattggt
ggtaaccaggtaaggttcggggtgtttaatacctccgccttacaatttacggctacccag
aatatcttcaaccgggacgccttattagcgagccggactaaaggagatgtaagattagtg
gccgccaaacaaacagaaaatgccaggattaacctggtggccaatgtttccaagaatttt
tatgacctgttggcaacggatcagcagagaaagattaccgatgagaatatagccatgttg
tcgcgcagccttagagatgcgcgcgccaggtttgatgccggtgtaacagataaaaccgat
tatcagcgggctactattgctttaaacaatgcaatggcttcaaaaaaggaaattgaggaa
gcattaaatgccaaggaggccaatcttaaattcctgatcaattatccaggcgataaggag
ctgtcgctaatgtatgacagcgccactttggagcaggaaatattcctggataccttgcag
gctcctgcctatacacgcagggtcgaataccagcagttgcaggcgcagcttaggttacag
gaagcaaacgttcgttataataaatggagttatatccctacggtgtctgctaacggggct
tacatccgtaattttttaaacgatgattttgcaaaactgtttaatcaaagcttccccaat
tcttacgcaggacttacagtaggttttcccatttttcagggcggcaaaagaaagaacaat
atcgttattgcggagcgccaggtagagcaaacccgcctggacctgattaattttagcaac
caggccagcagtgagtataaaacagctatggcacagtatcgggccagtatggctaattac
caggctctgaaagaaaatatggagctagccaaagaagtgcatcgtattatagagctgcaa
tacagggaggggattaaaacctacctggagctgataacagcgcaaaccgatctccgtgcg
tcacagatcaattatttcaatgccgtgtacggtttgttaagcagcaaaatagatgttcag
agagcagaaggatccattcaacccaaataa
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