Lacunisphaera limnophila: Verru16b_00778
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Entry
Verru16b_00778 CDS
T04567
Name
(GenBank) outer membrane channel protein
KO
K12340
outer membrane protein
Organism
obg
Lacunisphaera limnophila
Pathway
obg01501
beta-Lactam resistance
obg01503
Cationic antimicrobial peptide (CAMP) resistance
obg02020
Two-component system
obg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Verru16b_00778
09132 Signal transduction
02020 Two-component system
Verru16b_00778
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Verru16b_00778
01503 Cationic antimicrobial peptide (CAMP) resistance
Verru16b_00778
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
obg02000
]
Verru16b_00778
02044 Secretion system [BR:
obg02044
]
Verru16b_00778
01504 Antimicrobial resistance genes [BR:
obg01504
]
Verru16b_00778
Transporters [BR:
obg02000
]
Other transporters
Pores ion channels [TC:
1
]
Verru16b_00778
Secretion system [BR:
obg02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Verru16b_00778
RTX toxin transporter
Verru16b_00778
Multiple protein transporter
Verru16b_00778
RaxAB-RaxC type I secretion system protein
Verru16b_00778
Antimicrobial resistance genes [BR:
obg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Verru16b_00778
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Verru16b_00778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
YlqD
BST2
Motif
Other DBs
NCBI-ProteinID:
AOS43723
UniProt:
A0A1D8AS44
LinkDB
All DBs
Position
948158..949597
Genome browser
AA seq
479 aa
AA seq
DB search
MNEAVVRALDANLEVSIERLKPQIAEQRRMQALSAFDPRLDVSTVVESLERPQNTRDFFA
TGRAVEIMSEDNVRIEGSLGGLLPTGTRYNVTIRSYQLKNTLNREALARFYPEYTSSTTF
TVSQPLLRGAGLKANMAETRIAEMELRGAEQGLRGRVDQIATSVLDAYIESLYARELVRV
ITDRIALAEQLRVENDKRLRQGLMAPIDVMQAESTKAAAEIELIRAQSFLVETENRLREL
IFSDFVAAVDTDFDLVDRLGVVALNESLPALRNLALEHNAEYQVALQRVEAEKLRVRHAR
NQFLPRLDLQASVGLNGLGGDIGTSFSDYGERTQPDFTVGFVGSLPITFTAERARLREML
FRLREAETEVRRTTNRLYAQVHTAHTRVSSAMLRAASSARAVAAAEASLDAEQKRLANGL
TTSFNVLRLQDELAQARVNQLEAVAEGQKALAILWGVTGVLFERYQINLVEAPGAARRS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggccgtggtccgggccctcgacgccaacctggaggtctccatcgaacgcctg
aaaccgcaaatcgcggagcagcgccggatgcaggccctgagcgccttcgacccgcggctg
gacgtcagcactgtcgtggagtcgctcgagcgcccgcaaaacacccgcgacttcttcgcc
accggccgcgccgtggagatcatgagcgaggacaacgtccgcatcgaaggcagcctgggc
ggcctgctccccaccggcacgcgctacaatgtcacgatccgctcctaccagctgaagaac
accctcaatcgggaggcgctcgcccgtttctatcccgagtacaccagcagcaccacgttc
acggtgtcccagcccttgctgcgcggcgccggtctgaaggccaacatggccgagacccgc
atcgccgagatggaactgcgcggcgccgagcagggcctgcgcgggcgtgtcgaccagatc
gccacgagcgtcctcgacgcctacattgaatcgctctacgcccgcgagctggtgcgggtg
atcaccgatcgcatcgcgctggccgagcagctgcgcgtcgagaatgacaagcgcctccgc
cagggcctcatggccccgatcgacgtgatgcaggccgagtccaccaaggccgcggccgag
atcgagctcatccgcgcccagtccttcctggtggagaccgagaaccgcctccgcgaactg
atcttcagcgacttcgtcgccgcggtggacacggacttcgacctggtggaccgcctcggg
gtggttgccctgaatgaatccctgcccgccctgcgcaacctcgcgctggagcacaacgcc
gagtaccaggtcgccctgcaacgcgtggaggccgagaagctgcgcgtgcgccacgcccgc
aaccagttcctgccccggctggacctgcaggcctccgtcggcctcaacggcctcggcggc
gacatcggcacgagcttcagcgattacggcgagcggacccagcctgacttcacggtcggt
ttcgtcggttccctgcccatcaccttcaccgccgagcgggcccggctgcgcgagatgctc
ttccgcctgcgcgaggcggagacggaggtgcgccgcacgaccaaccgcctctacgcgcag
gtgcacaccgcccacacccgcgtttcctccgccatgctgcgcgccgcctcctcggcccgc
gccgtggccgcagccgaggcctccctcgacgccgagcagaagcgcctggcgaacggcctc
accaccagcttcaacgtgctgcgcctgcaggatgaactggcccaggctcgcgtgaaccaa
ctcgaggccgtggccgagggccagaaggcgctcgccatcctctggggcgtcaccggcgtg
ctcttcgaacgctatcagatcaacctcgtggaagcgcccggcgccgcccgccgctcatga
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