Afipia carboxidovorans OM5 (Mississippi): OCAR_6087
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Entry
OCAR_6087 CDS
T00783
Name
(GenBank) type I secretion outer membrane protein, TolC family
KO
K12340
outer membrane protein
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca01501
beta-Lactam resistance
oca01503
Cationic antimicrobial peptide (CAMP) resistance
oca02020
Two-component system
oca03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OCAR_6087
09132 Signal transduction
02020 Two-component system
OCAR_6087
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OCAR_6087
01503 Cationic antimicrobial peptide (CAMP) resistance
OCAR_6087
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oca02000
]
OCAR_6087
02044 Secretion system [BR:
oca02044
]
OCAR_6087
01504 Antimicrobial resistance genes [BR:
oca01504
]
OCAR_6087
Transporters [BR:
oca02000
]
Other transporters
Pores ion channels [TC:
1
]
OCAR_6087
Secretion system [BR:
oca02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
OCAR_6087
RTX toxin transporter
OCAR_6087
Multiple protein transporter
OCAR_6087
RaxAB-RaxC type I secretion system protein
OCAR_6087
Antimicrobial resistance genes [BR:
oca01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
OCAR_6087
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
OCAR_6087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF3584
Motif
Other DBs
NCBI-ProteinID:
ACI93202
UniProt:
B6JDX7
LinkDB
All DBs
Position
2027921..2029330
Genome browser
AA seq
469 aa
AA seq
DB search
MRFSGKAWRLALAASAAPVLLFAATPVLAETIEAALVRAYQDNPQLNAQRASVRATDENV
PQALSGYRPKVAVTASAGTQYQDIVTKQTVNGVVQRQNLSGVNAPRSFGATISQTLYNGG
QTANRTRAAESQVSAAREGLRVLEQSVLLAAATIYMDYLRDSAIVEVQRSNVNVLEQTLK
QTQDRFNVGEVTRTDVAQSQAQLAAGRTQLLAAESTLTTTRANFRRIIGSDPQNPQPGSP
VDRYLPKSLAQAINMGLVENPNVTAAMYGIDVSHLQVKVAEGALFPTLTLQGAVQHSNET
TVTTYQQFGASATAQLTVPIYQGGSEYSLIRQSKETLAQQRLNLDQVRDQTRATVAQSWG
QLTATKSQVASAQAQVTASEIALNGVREEARVGQRTTLDVLNAQQALVNARIALVTAQHD
RVVASYTVLNAVGRLSPVTLKLRATIYDPSVHYHQVRDSWAGVRTPDGR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttcagggaaagcctggcgtctggcgctggccgcaagcgcggcccccgtgctg
cttttcgctgcgactccggttttggcggaaactatcgaagcggcgcttgtgcgcgcctat
caggacaaccctcagcttaatgcgcagcgcgcttcggtgcgcgcgactgacgaaaacgtg
cctcaagcactgtccggttatcgtcccaaagtggcggtgacggcgagcgccggtacgcaa
tatcaggacatcgtcaccaagcagaccgtaaacggcgtggtgcagcggcagaacctctcc
ggcgtgaatgcaccgcgcagcttcggcgcgaccatttcgcaaactctttacaacggcggg
cagacagcaaaccgcacccgcgccgcggaaagccaggtttcggctgcgcgcgagggcttg
cgcgtgctcgagcagagcgtgctgctcgcggccgccacgatctacatggattacttgcgc
gactccgcgattgttgaagtccagcgcagcaacgtcaatgtgctggagcagacgctgaag
cagacgcaggatcgcttcaacgtcggcgaagtgacgcgcaccgacgtggcgcagtcgcag
gcgcagttggctgccggacgcacccagttgctcgctgcggaatcaacgctgacgacaacg
cgcgccaacttccgccgcatcatcggcagcgatccgcagaacccgcagccgggttcgccc
gtcgaccgctatctgccgaagtccctcgcgcaggccatcaacatgggcctcgtcgagaac
ccgaacgtcaccgctgcgatgtacggcatcgacgtcagccacctgcaggtcaaggtggcg
gagggcgcgctgtttccgaccttgacgctgcagggcgccgttcagcactcgaacgaaacc
accgtgacgacctaccagcagttcggcgcatcggcgacggcacagctcacggttccgatc
tatcagggcggctccgagtattcgctgatccgccagtcgaaagaaacgctggcgcagcag
cgcctcaacctcgatcaggttcgcgaccagacccgcgcgaccgtcgcgcagagctggggt
cagttgaccgccaccaagtcgcaggtcgcctcggctcaggcgcaggtaacggcgtccgag
atcgcactcaacggtgtacgcgaagaggcccgcgtcggtcagcgcaccacgctcgacgtc
ttgaacgcgcagcaggcgctggtgaacgcacgcatcgcgctcgtcaccgcgcagcatgat
cgcgtggtcgcgtcctacaccgtgctgaacgcggtcggccggctctcgccggtgacgctg
aagctccgcgccacgatctatgatccgtccgtgcactatcatcaggtgcgggatagctgg
gcgggcgtgcgcacaccggacggccgctga
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