Afipia carboxidovorans OM5 (Mississippi): OCAR_6245
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Entry
OCAR_6245 CDS
T00783
Name
(GenBank) gamma-aminobutyrate metabolism dehydratase/isomerase
KO
K14534
4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:
4.2.1.120
5.3.3.3
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00650
Butanoate metabolism
oca00720
Other carbon fixation pathways
oca01100
Metabolic pathways
oca01120
Microbial metabolism in diverse environments
oca01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
OCAR_6245
09102 Energy metabolism
00720 Other carbon fixation pathways
OCAR_6245
Enzymes [BR:
oca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.120 4-hydroxybutanoyl-CoA dehydratase
OCAR_6245
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.3 vinylacetyl-CoA Delta-isomerase
OCAR_6245
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HpaB_N
HpaB
Acyl-CoA_dh_M
Motif
Other DBs
NCBI-ProteinID:
ACI93358
UniProt:
B6JFM4
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All DBs
Position
2190989..2192539
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AA seq
516 aa
AA seq
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MLMSAADYRESLRAYKPKVFINGNVVESVADEPLLAPGIAGVGVTYDFALREEHAPLMTA
RQGTSGKIVNRMLHINETSQDLLYKLEAVRLVCKTSGCAQRYLAHDALNGLYQSTRLTDE
RHGTDYSQRFLAYLHHVQDNDLTLGIAMTDAKGDRSKRPSQQVNPDVYVHITERRKDGIV
IRGTKAIVTGAPYMHEFLVMPCRTHAPEDKDCAVCCAVPCDAPGVTIIARPAGRPGEAAA
KFSAKYGQSVGVVIFDDVFVPHDRVFLAGETEEGGFLTTSYATHHRHSCIGARAGFGDLL
IGAGALMIEANGLDAERHSHIREAMVELITITESFYACGVASSVYCTKDPAGSVMPDAVF
SNIGKLLLATKIYDMHRVAHYVSGGLIVALPGPDEDHNPETRASLAAVMGGRPDIPADQR
AEVARFIEDLTVSHEAGWYSVISLHGGGSPEAMKREIWRNYPVMEKIELVESLLDRGVLN
EGQRVSKQPGRCCATGCEVPEPLQRTDVPALTRAAE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgtcagccgccgactacagggagtctctccgcgcctacaagccgaaggtcttt
atcaacggcaacgttgtagagagcgtcgccgacgagccattgcttgcgccgggcattgcc
ggcgtcggcgtcacctatgatttcgcgttgcgcgaggaacacgcgccgctgatgacggcg
cggcaaggcacgtccggcaagatcgtcaaccggatgctgcacatcaacgagacctcgcag
gacctcctctataagctcgaagccgtgcgcctcgtctgcaagacgtccggctgcgcgcag
cgctacctcgcgcacgatgctctgaacggcctctatcaatcgacgcggctcaccgacgag
cgccacggcaccgactacagccaacgcttcctcgcctatctgcaccacgttcaggataac
gacctcacgctcggcatcgcgatgaccgacgccaagggcgaccgctccaagcgtcccagc
cagcaggtgaacccggacgtctatgtccacatcacggagcgccgcaaggacggcatcgtc
atccgcggcaccaaggcgatcgtgaccggcgcgccctacatgcacgaatttctcgtcatg
ccgtgccgcacgcacgcgccggaggacaaggattgcgcggtgtgctgcgccgtgccctgc
gacgcgcccggcgtcaccatcatcgcgcgcccggcgggacgcccgggcgaagcggcggcg
aaattctcggccaaatacggccagtcggtcggcgtcgtgatcttcgatgacgtcttcgtt
ccgcacgatcgcgttttcctggccggcgagaccgaggaaggcggcttccttacgacctcc
tacgccacccatcaccggcattcgtgcatcggcgcacgcgcaggctttggcgatctcctg
atcggcgcaggcgcgctgatgatcgaggccaatggcctcgatgccgaacgccactcccac
atccgcgaggcgatggtggaactcatcaccatcaccgagagcttttatgcctgcggcgtg
gcctcatcggtttactgcaccaaggacccggccggatcggtgatgccggatgcggtattc
tccaacatcggcaagctactgctcgccaccaagatctacgacatgcatcgtgtggcgcat
tatgtctcgggcggcctgatcgtcgcactccccggccccgacgaggaccacaatcccgag
acccgcgcctcgctcgcagccgtgatgggcggccggccggatattcccgccgatcagcga
gccgaggtggcgcgtttcatcgaagacctgacggtgtcgcacgaggcgggctggtactcg
gtgatttcgctgcacggcggcggttcgccggaagcaatgaagcgcgagatctggcgcaac
tatccagtcatggagaaaatcgaactggtggaaagcctgctcgaccgcggcgttctcaac
gaaggccagcgtgtctcgaagcaacccggccgctgctgtgctacgggctgcgaggtgccg
gagccgcttcagcggacggacgtccctgctctcacgcgcgctgcagaatag
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