Afipia carboxidovorans OM5 (Goettingen): OCA5_c14110
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Entry
OCA5_c14110 CDS
T01617
Symbol
tolC
Name
(GenBank) outer membrane efflux protein TolC
KO
K12340
outer membrane protein
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg01501
beta-Lactam resistance
ocg01503
Cationic antimicrobial peptide (CAMP) resistance
ocg02020
Two-component system
ocg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OCA5_c14110 (tolC)
09132 Signal transduction
02020 Two-component system
OCA5_c14110 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OCA5_c14110 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
OCA5_c14110 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocg02000
]
OCA5_c14110 (tolC)
02044 Secretion system [BR:
ocg02044
]
OCA5_c14110 (tolC)
01504 Antimicrobial resistance genes [BR:
ocg01504
]
OCA5_c14110 (tolC)
Transporters [BR:
ocg02000
]
Other transporters
Pores ion channels [TC:
1
]
OCA5_c14110 (tolC)
Secretion system [BR:
ocg02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
OCA5_c14110 (tolC)
RTX toxin transporter
OCA5_c14110 (tolC)
Multiple protein transporter
OCA5_c14110 (tolC)
RaxAB-RaxC type I secretion system protein
OCA5_c14110 (tolC)
Antimicrobial resistance genes [BR:
ocg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
OCA5_c14110 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
OCA5_c14110 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AEI06127
UniProt:
F8BXI9
LinkDB
All DBs
Position
complement(1533697..1535094)
Genome browser
AA seq
465 aa
AA seq
DB search
MIRRHSGQRCGAVAGLLMLGVAAGVQPVAGETLPEALAKAYQSSPQLNAQRAQQRATDEN
VPQALAGYRPQIVASLSAGLQTVRNTLPDNAIQAQGQKPWQIGVTVTQTLFNGFKTSSSV
RVAEFQVLSGREALRNIGQGVLLDAVTAYMNVIANQALVETQKLNVQFLRETLGVARTRL
EAGDVTPTDTAQAEARLSRGLADLNAAQVALQISEATYAQVIGSPPGRLAPAPTVDRFIP
HSQQAAIDRATRQNPAVIAASYDVDVATATISVAESSLLPQVNVQGTVSRQSDGDPFLSV
KRSDQATVLGQINVPIYDGGLAASQTRQAKEVVMQSRQVLEQVRNQARTAALSAYITNEG
AKVGLSAAESEVKAATVALAGVRREAQAGQRTTLDVLNSQADLTAARSRQILSQRDRVIA
SYTLLSAIGKLDVRTLGLNTPDYLPEVHYHQVRDAWHGLRTPSGQ
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtcggcattcagggcagcgttgcggggcggtggcgggactgctgatgctcggc
gtggcggcgggcgtgcagcccgtagccggcgaaacgctgccggaagccctcgccaaggcc
taccagtcgagcccgcagctcaacgcccagcgtgcccagcagcgcgcgaccgacgagaac
gtgccgcaggcgctcgcaggctaccgcccgcagatcgtggccagcctgtctgcgggcttg
cagacggtccgcaatacccttcccgacaatgcgattcaggctcaggggcagaagccctgg
cagatcggcgtcaccgtaacccagacgctgttcaacggcttcaagacctcgtcgagtgtc
cgggtcgccgaattccaggtgctgtcagggcgcgaggccctgcgcaatatcggccagggc
gtgctgctcgacgcggtgacggcctatatgaacgtcatcgccaatcaggcgctggtcgag
acccagaagctcaacgtccagttcctgcgcgagacactcggcgtcgcccgcacccgtctt
gaggccggcgacgtgacgccgaccgacaccgcacaagccgaggcgcggctgagccgcggg
ctcgccgacctcaacgccgcacaggtcgcgctccagatcagcgaggcgacctatgcgcag
gtgatcggctcgccgccgggacggcttgctcctgcgcccacggtggaccgcttcatcccg
cacagccagcaggcggcgattgaccgcgccacccgccagaacccggcggtgatcgcggcc
tcctatgacgtcgatgttgccaccgccaccatcagcgtcgcggaatcgagcctgctgccg
caggtcaacgtgcagggcacggtcagccgccagtccgacggcgatccgttcctcagcgtg
aagcgctccgatcaggcgaccgtcctcggccagatcaacgtgccgatctacgatggcggt
ctcgccgcctcgcagacccggcaggccaaggaagtcgtgatgcagagccggcaggtgctg
gagcaggtccgtaatcaggcacggacagcggcgctcagcgcctacatcaccaatgaaggc
gcaaaggtcggtctttcggccgccgaaagcgaagtgaaggcagcaactgttgcccttgcc
ggcgtgcggcgcgaggcgcaggcgggccagcgcaccacactcgacgtactgaactcgcag
gccgaccttaccgccgcgcgcagccgccagatcctcagccagcgcgatcgggtgatcgcc
tcctacaccttgctgagtgcaatcggaaagctcgacgtccgcaccctcggcctcaacacc
ccggattatctgcccgaagttcactaccatcaggtgcgtgacgcatggcacggcctgcgc
acaccatcgggacagtaa
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