Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385253
Help
Entry
139385253 CDS
T10872
Name
(RefSeq) exostosin-2-like isoform X1
KO
K02367
glucuronyl/N-acetylglucosaminyl transferase EXT2 [EC:
2.4.1.224
2.4.1.225
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ocla01100
Metabolic pathways
Module
ocla_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
Enzymes [BR:
ocla01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
139385253
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
139385253
Glycosyltransferases [BR:
ocla01003
]
Glycan extension
O-Glycan
139385253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
Motif
Other DBs
NCBI-GeneID:
139385253
NCBI-ProteinID:
XP_070986511
LinkDB
All DBs
Position
26:23368348..23389336
Genome browser
AA seq
724 aa
AA seq
DB search
MVRLSMCASGKYSSRGPALIPRMKTKHRIYYITLFSVVLLGLIATGMFQFWPHSIESTAD
WSLDRRSVHDAPLVQLPVSNPIPERGDLSCRMHTCFDVYRCGYNPKNRIKVYIYPLQRFV
DEGGVPISSTGLSREYNDLLSAISDSEFYTDDVTRACLFVPSIDVLNQNSLRIRETAQAL
AMLPRWDKGMNHLLFNMLPGGPPDYNTALDVPRDRALLAGGGFSTWTYRQGYDVSIPVYS
PLSADVELPERQPGPRRYFILSSQTAIHREYRAELERLKEENGEALLLLDKCSNLSQGVA
SARKRCYKGQVFDYPLILQESSFCVVLRGARLGQATLSDVLQAGCVPVILADSYILPFSE
VLDWKRASVVIPEEKLPEMYTILKTIPHRQVEEMQRQARWFWDAYFSSMKAIGMTTLQII
NDRIYPYAARTYEQWNNPPVVKWSSVNSPLFLPLIPPRSPGFTAVVLTYDRIESLFRVIT
EISKVPSLAKLLVVWNNQNKSPPEDYLWPKIAAPLKVVRTKENKLSNRFFPYDEIETEAV
LAIDDDIIMLTSDELQFGYEVWREFPDRLVGYPGRLHLWDHEMGKWKYESEWTNEVSMVL
TGAAFYHKYFNYLYTYKMPGDIKNWVDAHMNCEDIAINFLVANITGKAPIKVTPRKKFKC
PECTAIDGLSLDQTHMVERSECINKFASVFGTMPLKVVEHRADPVLYKDDFPEKLKSFPN
IGSL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggtcaggctcagcatgtgcgcgtctggaaagtacagttcacggggcccggctttgatt
ccacggatgaaaaccaagcaccgcatctactacatcactctgttctctgtggtgctgttg
ggactcatcgccacagggatgttccagttctggccacactccatcgaatcaacggcagac
tggagcctggaccgacgcagcgtgcacgatgcacctctcgtccaactgcctgtctccaac
cctattcctgagagaggggaccttagctgcagaatgcacacttgttttgatgtgtatcga
tgtggctacaaccctaagaatagaatcaaggtgtacatctatcctctgcagcgttttgtg
gatgagggaggagtgccaatcagcagcacaggcctgtctcgagagtacaatgacctgctc
agtgccatctccgacagtgagttctacactgatgatgtcaccagggcatgcctattcgtg
ccctctattgatgtgctcaatcagaactctctgcgcatccgggagactgcccaggctctg
gccatgctccccaggtgggacaaagggatgaaccaccttctgttcaacatgttacctgga
ggacctccagactacaacacagcccttgatgtaccaagagacagggctctgcttgcaggg
ggaggcttctccacgtggacctacaggcagggttatgacgtcagcatccctgtgtacagc
cctctgtctgcagacgtagagctgcccgagagacagcctgggccccggcgctacttcatt
ctgtcgtctcagacggccatccaccgtgagtaccgggcagagctggagaggctgaaggag
gagaacggggaggctctgctcctcctggacaagtgcagcaacctctctcagggagtcgcc
tcagcgaggaaacgctgctacaagggccaggtgttcgactaccccctgatcctccaggag
tcgtcgttctgtgtggtgctgcgtggggctcggctgggacaggccaccctcagtgatgtg
ctgcaggctggctgtgtccctgtcatcctagcagactcatacatcctgcccttctctgag
gtcctcgactggaagagggcatccgtggtcattccagaggagaagctcccagagatgtac
accatcttgaagactatccctcacaggcaggtggaggagatgcaaagacaggcccgctgg
ttctgggacgcttacttcagctccatgaaggccatcggtatgacaacgcttcagatcatc
aatgaccgcatctacccctatgctgcccgcacctacgaacagtggaacaacccccctgtg
gtgaagtggtcgagtgtgaacagccctctgttcctgcctctcatcccaccgaggtcccca
gggttcactgctgtggtgctgacctacgaccgtatcgagagcctcttccgggtcatcact
gagatctccaaggttcccagcttggccaagctactggtggtgtggaacaaccagaacaag
agtccccctgaagattatttatggccgaagattgccgcgcctctcaaggtggtgcgcacc
aaagagaacaagctcagcaaccgcttcttcccctacgacgagatcgagactgaggccgtg
ctggccatcgacgatgacatcatcatgctgacgtctgatgaactacagtttggctacgag
gtgtggagggagttcccagaccggttggtggggtacccgggtcggctccacctgtgggac
cacgagatggggaagtggaagtacgagtccgagtggaccaacgaggtgtccatggttctg
actggagcagccttctaccacaagtacttcaactacctgtacacttacaagatgccagga
gacatcaagaactgggtggatgctcatatgaactgtgaggatatcgccatcaacttcctg
gtggccaacatcaccggcaaagcccccataaaggtgaccccaaggaagaagttcaagtgt
cctgagtgcacagccattgacggtctgtccctggaccagacacacatggtagagagatca
gagtgcatcaacaagtttgcgtcggtgttcggcaccatgcccctgaaggtagtggaacac
cgtgcagacccagtcctctacaaggacgacttcccagagaagctcaagagtttccccaac
atcggcagtctctga
DBGET
integrated database retrieval system
