Afipia carboxidovorans OM4: OCA4_c19410
Help
Entry
OCA4_c19410 CDS
T01967
Name
(GenBank) outer membrane protein, TolC family protein
KO
K12340
outer membrane protein
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco01501
beta-Lactam resistance
oco01503
Cationic antimicrobial peptide (CAMP) resistance
oco02020
Two-component system
oco03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OCA4_c19410
09132 Signal transduction
02020 Two-component system
OCA4_c19410
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OCA4_c19410
01503 Cationic antimicrobial peptide (CAMP) resistance
OCA4_c19410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oco02000
]
OCA4_c19410
02044 Secretion system [BR:
oco02044
]
OCA4_c19410
01504 Antimicrobial resistance genes [BR:
oco01504
]
OCA4_c19410
Transporters [BR:
oco02000
]
Other transporters
Pores ion channels [TC:
1
]
OCA4_c19410
Secretion system [BR:
oco02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
OCA4_c19410
RTX toxin transporter
OCA4_c19410
Multiple protein transporter
OCA4_c19410
RaxAB-RaxC type I secretion system protein
OCA4_c19410
Antimicrobial resistance genes [BR:
oco01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
OCA4_c19410
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
OCA4_c19410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF3584
Motif
Other DBs
NCBI-ProteinID:
AEI03077
LinkDB
All DBs
Position
complement(2096316..2097725)
Genome browser
AA seq
469 aa
AA seq
DB search
MRFSGKAWRLALAASAAPVLLFAATPVLAETIEAALVRAYQDNPQLNAQRASVRATDENV
PQALSGYRPKVAVTASAGTQYQDIVTKQTVNGVVQRQNLSGVNAPRSFGATISQTLYNGG
QTANRTRAAESQVSAAREGLRVLEQSVLLAAATIYMDYLRDSAIVEVQRSNVNVLEQTLK
QTQDRFNVGEVTRTDVAQSQAQLAAGRTQLLAAESTLTTTRANFRRIIGSDPQNPQPGSP
VDRYLPKSLAQAINMGLVENPNVTAAMYGIDVSHLQVKVAEGALFPTLTLQGAVQHSNET
TVTTYQQFGASATAQLTVPIYQGGSEYSLIRQSKETLAQQRLNLDQVRDQTRATVAQSWG
QLTATKSQVASAQAQVTASEIALNGVREEARVGQRTTLDVLNAQQALVNARIALVTAQHD
RVVASYTVLNAVGRLSPVTLKLRATIYDPSVHYHQVRDSWAGVRTPDGR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttcagggaaagcctggcgtctggcgctggccgcaagcgcggcccccgtgctg
cttttcgctgcgactccggttttggcggaaactatcgaagcggcgcttgtgcgcgcctat
caggacaaccctcagcttaatgcgcagcgcgcttcggtgcgcgcgactgacgaaaacgtg
cctcaagcactgtccggttatcgtcccaaagtggcggtgacggcgagcgccggtacgcaa
tatcaggacatcgtcaccaagcagaccgtaaacggcgtggtgcagcggcagaacctctcc
ggcgtgaatgcaccgcgcagcttcggcgcgaccatttcgcaaactctttacaacggcggg
cagacagcaaaccgcacccgcgccgcggaaagccaggtttcggctgcgcgcgagggcttg
cgcgtgctcgagcagagcgtgctgctcgcggccgccacgatctacatggattacttgcgc
gactccgcgattgttgaagtccagcgcagcaacgtcaatgtgctggagcagacgctgaag
cagacgcaggatcgcttcaacgtcggcgaagtgacgcgcaccgacgtggcgcagtcgcag
gcgcagttggctgccggacgcacccagttgctcgctgcggaatcaacgctgacgacaacg
cgcgccaacttccgccgcatcatcggcagcgatccgcagaacccgcagccgggttcgccc
gtcgaccgctatctgccgaagtccctcgcgcaggccatcaacatgggcctcgtcgagaac
ccgaacgtcaccgctgcgatgtacggcatcgacgtcagccacctgcaggtcaaggtggcg
gagggcgcgctgtttccgaccttgacgctgcagggcgccgttcagcactcgaacgaaacc
accgtgacgacctaccagcagttcggcgcatcggcgacggcacagctcacggttccgatc
tatcagggcggctccgagtattcgctgatccgccagtcgaaagaaacgctggcgcagcag
cgcctcaacctcgatcaggttcgcgaccagacccgcgcgaccgtcgcgcagagctggggt
cagttgaccgccaccaagtcgcaggtcgcctcggctcaggcgcaggtaacggcgtccgag
atcgcactcaacggtgtacgcgaagaggcccgcgtcggtcagcgcaccacgctcgacgtc
ttgaacgcgcagcaggcgctggtgaacgcacgcatcgcgctcgtcaccgcgcagcatgat
cgcgtggtcgcgtcctacaccgtgctgaacgcggtcggccggctctcgccggtgacgctg
aagctccgcgccacgatctatgatccgtccgtgcactatcatcaggtgcgggatagctgg
gcgggcgtgcgcacaccggacggccgctga
DBGET
integrated database retrieval system
