Osmerus eperlanus (European smelt): 134023685
Help
Entry
134023685 CDS
T10927
Symbol
adar
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase isoform X1
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04622
RIG-I-like receptor signaling pathway
oep04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
134023685 (adar)
04623 Cytosolic DNA-sensing pathway
134023685 (adar)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oep03041
]
134023685 (adar)
Enzymes [BR:
oep01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
134023685 (adar)
Spliceosome [BR:
oep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134023685 (adar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
Motif
Other DBs
NCBI-GeneID:
134023685
NCBI-ProteinID:
XP_062321966
LinkDB
All DBs
Position
7:complement(21750402..21767783)
Genome browser
AA seq
1418 aa
AA seq
DB search
MSRGRGGPSKEQYHRPPLSHLQAKPHFYRLGSVRTPPQQTPHQNDFPSLPVPPLVPSHSL
PHPLFPVTPPLSGPNPVRTLHPGASNGSERLNSNRVPILNSFQDQQVQFLRGQNLEAPQY
RVSPRGGGPRAVGVILTGPPYSPYQPQSGFSRFPHHSNSPRGRGGCSRDRGRGSSRDLGY
PPFQGAPRGNPGPQHWNHNQNKNQNHNQYSNRQWSPKAEYSESLLNGLQSLSFNRERPSR
GGESIDKASVSSSNSGKKTLTPVQLTPDIQELIVRCLTDLSPTESFQAKVLAKKLHLPKK
IVNQALYALERTQKATKQGSSPPEWTLFRESPQGGEDQDTQNETHSQQTQSTGESQPAHK
RFLSPVKKEHAAVDAEVSEDVQQANAQPGEAEGEEDSDAESNSFSSSSSLESSDSFHEPP
QAQDLEEPDPVTASSASQPLDLHLETPNMAESREQKEQVMQYLLDTREVTALVIAKNMGL
KTAKQVNPTLYALEKQGDVVKNSDVTPFTWDLSDHRRDRMQRSLKASQHAATEMQVVEAG
GGAGQAGAVTSEILSPFPGRDTLPSAPGLQSQESQEGEDEANGDQWASDDIPEFLNAIRR
QTDVERAAAMGTVAVSLAAPPPQNLRAKLQEVKTKNPVSGLMEYAQYLGHNCEFLLLDQS
GPSHDPRFRMQVMLDGRLFPIAEASNKKVAKKDAAAATLRILVREMDGGGPEGEEGAVAG
MDQAMDPNPDTAVSVSSTSAIGAVEGPPQALSRSLPGGKNPVSMLMEFSQRTGSPIEFIN
TGQEGPPHDPRFMFRVKIGETLCAEASAPSKKAARQLAAEEAVKELMSDGRLQLNKPQLP
LCPSGDGEGGASMPPCPSLPPLTAEELRAAHEAGVGDLINHLNNNAVSGLLEYARARGFA
AEIRLVGQAGPPHEPKFTYQAKLGGRWFPPVRASNKKQGKQEAADAALRVLIGEAEKAAR
TGELTPAEVLILLPVSGSTLHDQIAMLSHQRFNSLTTRIQHSLLGRKILATFVMRRGEGL
GTVVSLGTGNRCVKGEELSLKGDTVNDCHAEIISRRGFVRFLYNELLKHCEGSEDSIFES
AEENKLQIKPDITFHLYISTAPCGDGALFDKSCSESAEEGGAGHQPLFENAKQGKLRTKV
ENGEGTIPVESSAIVPTWDGIQHGERLRTMSCSDKILRWNVLGLQGALLSHFLHPIYLKS
ITLGYLYSHGHLTRAVCCRLARDGEAFTKALPPPYTLNHPEVGRVSVYDSTRHTGKTKES
SVNWSQPDHITVEVLDGTKGKLDGPKLDVSRVSKSNLFRVFRTLCQRCGREELLDLPSYA
QAKMAAASFQQAKEHFFQALDTHGYGSWIGKPLEEKSFEAGEGAGGAPDVQAVAQTQGGG
SVAVGNQGHGNNNNNHGVPAPVFSPGQDWLGVARTHTM
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggtagaggagggccctccaaagagcagtaccaccgcccccccctctcacac
ctccaggccaagccccacttctacagactcgggtccgtgcgaactcccccgcagcagacc
ccgcaccagaacgacttccccagtctccctgttcctccccttgtgccctcccactcgctg
ccccatcccctcttccccgtcacccctcccttatctgggccgaacccggtccgaaccctc
caccccggggcatcgaacgggtcggagcggctgaactcaaaccgtgtgccgattctaaac
tcgtttcaggaccagcaggtccagttcctaaggggacagaaccttgaggcgccccagtac
agggtgagccccagaggaggggggccgagggctgttggtgtgatactcaccgggccgcct
tacagtccgtaccagcctcagtccggcttcagccggttcccccaccacagcaacagcccc
cggggtagagggggctgcagtcgagatcgaggcagagggagcagcagagatttggggtac
ccaccttttcaaggagccccgagaggcaaccctggaccacagcactggaaccacaaccag
aacaaaaaccagaaccacaaccagtactctaacaggcaatggagtcctaaagcggaatat
tctgaatctctattgaacggcctgcagagtttatcctttaacagagagcgacccagccga
ggaggggagagcattgacaaagcgtctgtttcaagttccaactccggcaagaagactttg
actcccgttcagctaacacctgatattcaggagctgatcgtcagatgcctgactgatttg
agccccactgaaagttttcaagcaaaggtactagccaaaaagctacatctgcccaaaaag
atcgtcaaccaggctctgtatgctcttgagcgcacgcagaaagcaacgaaacaagggagc
agtcctccagagtggactctgttcagggagtctccccaaggtggggaagaccaggacacg
cagaacgaaacacattcccaacagacgcaaagcacaggagagtcgcagccagctcacaaa
cgctttctgtcaccggtaaagaaggaacatgcggctgtagacgctgaggtcagcgaagac
gtccaacaagccaacgcacaacccggagaggctgaaggggaagaagattctgacgccgaa
tcaaattccttctcgtcttcatcttctttggaatcgtcagactcgttccacgaaccgcca
caagcacaagacctggaagaaccggacccggtcacagccagctctgccagccagcctctc
gacctccacctcgaaacccccaacatggcggaaagccgggaacagaaggagcaggtgatg
cagtacctgctagacaccagggaggtgaccgctctggtcatagccaaaaacatgggcctg
aagaccgccaagcaggtgaaccccaccctctacgccctggagaagcaaggggacgtggtc
aagaactcggatgttacccctttcacctgggacctgtctgaccaccgcagggacaggatg
cagcgcagcctcaaggcctcgcagcacgccgccacggagatgcaggtggtggaggcagga
ggtggggccgggcaagcaggagcggtcacctcagaaatattgtccccatttccagggagg
gacacactcccgtctgccccaggtcttcagtcgcaggagagccaagagggggaagacgag
gctaatggggaccagtgggccagtgacgacataccagaattccttaatgctattcgccgg
cagactgatgtggaaagggctgctgccatgggaacggtcgccgtgtccttggcagcacct
cctccccaaaacctgcgggcgaaactgcaagaagtgaaaactaagaaccccgtcagtggc
ttgatggagtatgcccagtacctagggcacaactgtgagttcctgcttcttgaccaatca
gggccctcccacgaccccagatttcgtatgcaggtcatgctggatggcaggttgtttcca
atcgctgaggcgtccaataagaaggtggcgaagaaagatgccgcggcagcaaccctccgc
atcctggtccgggagatggatggaggaggtccggagggggaggagggggccgtcgctggc
atggatcaggccatggatcccaatccagacactgctgtaagtgtgtccagcaccagcgcc
attggcgctgtggagggcccgccccaggccctgtcccgctcgctccccggggggaagaac
cccgtgtccatgctgatggagttcagccagcgcacaggaagccccatcgagttcatcaac
acgggccaggagggcccgccacacgacccacggtttatgttcagggtgaagatcggagag
acgctgtgtgctgaggcctcagcccccagcaagaaggctgcccggcagctcgctgcagaa
gaggccgtcaaagagctgatgtcagacgggaggctccagcttaacaagccccagctgccc
ctctgtccgtcaggggacggtgaggggggtgcctccatgcctccctgcccctccctccct
cccctgacagcggaggagctccgcgcggcccacgaggccggggtaggtgacctcatcaac
cacctgaacaacaacgcagtgtctggccttctggagtacgccagggccaggggcttcgct
gctgagatcaggctggtgggccaggccggaccgccgcatgaacccaagttcacctaccag
gctaagctggggggtcgctggttccctccagtgcgcgcctccaacaagaagcaggggaag
caggaggctgcagatgccgctctgagggtgctgattggggaggcagagaaggcggcccgt
actggggagctcaccccagcagaggtactcattctgctgcctgtgagcggcagtactctg
catgaccagatcgccatgctgagccaccagcgcttcaactccctgaccacgcgcatacag
cacagccttctgggacgcaagatcctggccacctttgtcatgaggaggggggagggtctg
gggaccgtggtgagcctcggcacaggaaatcgctgtgttaaaggagaggagctgagtctt
aaaggggacactgtgaacgactgccacgcagaaatcatctccaggagggggttcgtgagg
tttctgtataatgagttgcttaagcactgtgaagggtcggaggacagtatctttgagtct
gcagaggaaaacaagcttcagatcaaacccgacatcacctttcacctctacatcagcacg
gccccctgtggagatggcgctctgttcgacaagtcctgcagtgagtcagcagaggagggc
ggtgcggggcaccagcctctgtttgagaacgccaaacagggcaagctccgcaccaaggtg
gagaacggtgagggcaccatcccagtggagtccagtgccatcgtgcccacctgggacggc
atccagcatggggagagactgaggaccatgagctgcagcgacaagatcctgcgctggaac
gtgctgggcctgcagggggcgctgctcagccacttcctgcaccccatctacctcaagtcc
atcactctgggctacctgtacagccacggtcacctgacccgagccgtgtgctgtaggctg
gccagagacggcgaggcgttcaccaaagctcttcctcctccgtacacactcaaccaccca
gaggtgggcagggtgagtgtgtacgactcgacgcgccacacggggaagaccaaggagtcg
agcgtgaactggagccagccagaccacatcaccgtggaggtgctggacggcaccaagggc
aaactggacggccccaagctggacgtgtcgcgggtctccaagtccaacctgttccgtgtg
ttccggacgctgtgccagcgctgtggccgagaagagctcctggacctgccgtcgtacgcc
caggccaagatggccgccgcctccttccagcaggccaaggagcacttcttccaggccctg
gacacgcacgggtacggctcctggatcggcaagcccctggaggagaagagcttcgaggcg
ggggaaggggcggggggggcgccggatgttcaggctgtggcgcagacgcaaggaggggga
agtgttgctgtcggcaaccagggacatggcaataacaacaacaatcatggagtcccagct
cctgtgttcagtccgggccaggattggcttggtgtggcacgtacacacaccatgtag
DBGET
integrated database retrieval system
