Oncorhynchus kisutch (coho salmon): 116376524
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Entry
116376524 CDS
T09179
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase-like isoform X1
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04622
RIG-I-like receptor signaling pathway
oki04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
116376524
04623 Cytosolic DNA-sensing pathway
116376524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oki03041
]
116376524
Enzymes [BR:
oki01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
116376524
Spliceosome [BR:
oki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116376524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
Motif
Other DBs
NCBI-GeneID:
116376524
NCBI-ProteinID:
XP_031693338
Ensembl:
ENSOKIG00005000401
LinkDB
All DBs
Position
LG2:3224639..3242258
Genome browser
AA seq
1389 aa
AA seq
DB search
MSRGRGGPPIEHYHRPPLPQLQAKQQYYRAGPLGFHPRAPPQQAPHPNVHSYLSPVPPLV
PPSAHSQPLYPSVPPPPGHSPALNQQSSCPSGPNSFRQQQVHFLRGQNTEAPQFRVSPRG
GAQSLGRGGPNGLYNESNQTQAGYSRYSQNSSRGRGGYSSERGRGNGRDFGYPPSQGPPR
GPTGPRFWNQKQTSTQKQGFNRQWSLHADCADRPSFSEGFQSLSLDRERSYRGRVDRGDN
FDKASVGSSNNSNNKSVPTFQPPDIREQVLQALADLIPGEKLQAKCLAKTLRLPKKFINQ
ALYGLERDKKASKHGESPPEWTAYVEPQEEPESRDSDPESPRSQPRERSVESQERPSEED
CSHFLSVKEEDVVIEAEIQQIEAQGPEGDKEEDYYVESDSHSSSSEPSESYRQHSQSQTQ
QPSINSSSNEELDLDLDESDMADCGSNQKELILQYLLEAGEATALVISKNLGLRGAKQVN
PTLYAMEKQGDVSRNAEVTPHIWELSVHRRERMERSLKAERSAPAKVEGMGSGFQAVPPG
LECLEANAEAEDESNGGQWATDDIPEFLNAISRDGGGTVAVSLAAPPPQNLRAKLQEVRA
KNPVSGLMEFAQYQGHNCEFLLLDQSGPSHDPRFRMQVMLDGRLFPVAEASNKKVAKKDA
AAATLRILLREIEGGGAEEGLTAGVDQAMDPTSDVPVSLKCVRVCVEEVVEGPPQALSRS
LPGGKNPVSMLMEYSQRTGNPIEFINTGQEGPPHDPRFMFRVKIGESLCAESSAPSKKAA
RQLAAEEAVKELMADGRLQLNKPQFPLCLSGDEGGFMPACPSLPPLTEEELRSAHEAGVG
DLISHLNNNAVSGLLEYARARGFAAEIRLVGQSGPPHEPKFTYQAKLGGRWFPPVCASNK
KQGKQEAADAALRVLIGEAEKAARTGELTPAELPLSGGTIHDQIAMLSHQRFNALTTRIQ
HSLLGRKILATIVMKRGEGLGTVVSLGTGNRCVKGEELSLKGDTVNDCHAEIISRRGFIR
FLYAELLKHCEGTEDSIFEPAEENKLRIKPDTTFHLYISTAPCGDGALFDKSCSEDAGDG
QGHQPLFENAKQGKLRTKVENGEGTIPVESSTIVPTWDGIQHGERLRTMSCSDKILRWNV
LGLQGALLSNFLHPIYLASITLGYLYSHGHLTRAVCCRLARDGEAFSKSLPAPYTLNHPE
VGRVSVYDSTRHTGKTKESSVNWSQPDHITVEVLDGTKGKLDGYAPRTTTRTRPSDLIHP
HPDSSTSPKLDVSRVSKSNIFRQFRLLCQQCGRQDLLALPSYAQAKMAAMSFQVAKQQFF
DALGSHGYGAWIGKPLEEKSFDEAAASDGQGAGSVANSNQGYNNNNSYGSTTTDYNSSQW
GSSAYTQAM
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggacgaggagggccccccatagagcattaccaccgaccccctctcccccaa
ctgcaggctaagcaacaatactacagagctggacccctgggatttcaccccagagccccc
ccgcaacaggccccacacccaaacgtccattcatacctgagcccagttccccctctagta
ccacccagtgcccactctcagcctctctacccctctgtccctcccccacccggtcacagc
ccagccctgaatcagcagagctcttgtcccagtggtcctaactccttcaggcagcagcag
gtccacttcctgaggggacagaacactgaggctccccagtttagggtgagccccagagga
ggggcgcagagcttgggtcgagggggaccgaacggtctctataacgaatcgaaccagacc
caggcagggtacagcagatactcccaaaacagctctagggggagagggggatacagcagc
gagcgaggcagagggaacggtagggacttcgggtacccgcccagtcagggaccccctaga
ggaccaaccggccctagattctggaaccagaagcagacttcaacccaaaagcaaggcttc
aacagacagtggagccttcatgcagactgtgctgacaggccgtctttctcagaaggcttt
caaagtttatccttagacagagagaggtcctacagaggaagagttgaccgaggcgacaac
tttgacaaagcttctgttggtagtagtaataattcaaacaacaagagtgtccctacattt
cagccacctgacatccgagagcaagttttgcaagccttagcagatttgatccccggtgaa
aagctacaagcaaagtgtttggcgaaaacgctgcggttgcccaaaaagtttatcaaccag
gccctttacggtctcgagcgtgataagaaagcttcaaaacacggtgaaagtcctccagag
tggactgcctacgtagaaccacaggaagaaccggaaagtagagattctgatccggaaagc
ccacgttcccaaccgagggaacgttctgtggagtcacaggaaaggccttcagaagaagat
tgctctcacttcctgtctgtgaaggaggaggacgttgtcattgaggctgagatccagcaa
attgaagcgcagggtcctgagggcgacaaagaagaagattactacgtagaatctgattca
cactcctcttcctcagaaccatctgagtcatatcggcaacattcccagtcccaaacccaa
caacccagtatcaacagcagcagtaacgaagagcttgacctagaccttgacgagagcgac
atggcggactgcggcagtaatcagaaggagttgatcctgcagtatctgctggaggcaggg
gaggccacagccctggtgatctccaagaacctgggcctgaggggcgccaagcaggtcaac
cccaccctatacgccatggagaagcagggcgacgtgagccgcaacgcagaggtgactcct
cacatctgggagctatctgtccatcgcagggagaggatggagaggagcctcaaggcggag
cgcagcgcccctgcaaaggtcgaaggaatggggtccggattccaggcagtgccacctgga
ttggagtgtctagaggccaacgctgaggcggaggacgagtcgaacggagggcagtgggcg
accgacgatatccccgaattcctcaacgccatcagccgggatggaggggggacagtagca
gtctccttggcagcgcccccacctcagaacctccgtgccaaactccaggaggtgagggcc
aagaaccccgtcagcggcctgatggagtttgcccagtaccagggacacaattgcgagttc
ttgctcctcgaccaatcagggccctcacatgaccccagattccgtatgcaggtcatgctg
gacggcaggttgtttcctgttgctgaggcatctaataaaaaggtggctaagaaagatgct
gctgcagcaaccctgaggattctgctgcgtgagatagaggggggaggggctgaggagggg
ctcactgcaggggtggaccaggccatggaccccacctctgacgtccctgtaagtctgaag
tgtgttcgtgtgtgtgtggaggaggtggtggagggtccgccccaggccctgtcccgttcc
ctgccggggggtaagaacccagtgtccatgctaatggagtacagtcagcgcactggaaac
cccatcgagttcatcaacactggacaggagggcccacctcacgacccacggttcatgttc
agggtgaagatcggggaaagcctgtgtgctgagagctcagcccccagtaagaaggctgcc
aggcagctggctgcagaggaggcagtcaaggagttaatggccgacgggagactgcagctc
aacaagccccagtttcccctgtgtctgtctggtgatgaagggggcttcatgcccgcttgc
ccatccctgcccccgctgacagaggaggagctgcgttctgcccacgaggcgggggttggt
gacctcatcagccacctaaacaacaacgccgtgtcaggcctgctggagtacgcccgggcc
aggggcttcgctgcagagatacgactggtcgggcagtcaggaccaccgcacgagcccaag
tttacctaccaggctaaactagggggtcgctggttccctcctgtctgtgcttccaataag
aagcaagggaaacaggaagcagctgatgcagctctgagggttctgattggagaggcagag
aaggctgcccgcaccggggaactaacccctgcagagctgccactgagtggtgggacaatc
catgaccagatcgccatgttgagtcaccagcgcttcaacgccctcaccacacgcatacag
cacagtcttctgggaaggaagatcctcgccaccatcgtcatgaagaggggggaagggctg
gggaccgtggtcagtctgggaacaggaaatcgctgtgttaaaggggaggagctgagtctt
aaaggggacaccgttaatgactgccacgcagaaatcatctccaggagagggtttatcagg
tttctatatgctgagttgctgaagcactgtgaaggaacagaggacagcatatttgagcca
gctgaggagaacaagctccggatcaaacctgacaccaccttccacctctatatcagtact
gctccgtgcggagacggggcgttgtttgataagtcgtgcagcgaggacgcgggggacggc
cagggccaccagcccctgtttgagaacgccaagcagggcaagctgcgcaccaaggtggag
aatggtgagggcaccatcccggtagagtcatcgacaatcgtgcctacctgggacggcatc
cagcacggcgagcgtctgaggaccatgagctgtagcgacaagatccttcgctggaacgtc
ctgggtctgcagggagccctgctctccaacttcctccatcctatctacctggcttcaatc
accctgggctacctgtacagccatggccacctgacacgtgctgtctgctgccgattggcc
agagacggcgaagccttctccaagagtctacctgctccctacacactcaaccaccccgag
gtgggcagggtgagtgtgtatgactcgacgcgtcacacagggaagaccaaggagtccagc
gtgaactggagccagccagaccacatcactgtggaggtgctggatgggaccaagggcaaa
ctggacgggtacgcaccccgcaccacaactagaaccagaccctcagacctcatccaccct
catccagatagcagcaccagccccaaactggacgtgtcgcgggtctccaagtccaacatc
ttccgtcaattccggttgttatgccaacagtgcgggcgccaggacctgctggctctcccg
tcttacgcccaagccaagatggccgccatgtccttccaggtcgccaagcagcagttcttt
gatgcgctcggtagccatggttacggtgcttggattggcaagccattggaggagaagagc
tttgacgaagcggcggcctctgatggccaaggggcaggaagtgttgctaatagcaaccag
ggatacaacaacaacaatagctatggaagcacaaccactgactataacagcagccagtgg
ggtagtagtgcgtacacacaggccatgtag
DBGET
integrated database retrieval system
