Oryzias latipes (Japanese medaka): 101155879
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Entry
101155879 CDS
T02443
Symbol
adar
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04622
RIG-I-like receptor signaling pathway
ola04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
101155879 (adar)
04623 Cytosolic DNA-sensing pathway
101155879 (adar)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101155879 (adar)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
101155879 (adar)
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101155879 (adar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
DUF7660
Dicer_dimer
Motif
Other DBs
NCBI-GeneID:
101155879
NCBI-ProteinID:
XP_004078197
UniProt:
H2M250
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All DBs
Position
16:18626894..18643173
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AA seq
1336 aa
AA seq
DB search
MSRGRGGSYKEHPQRHKPPHLQVKENYYRQLFPRADPEQIPNQLYSNSPGCPSVPLRSPS
SILPSAPPIPNHINVANSGAFNCSNYQNLGFGPTPNSFQYKQAEFLRGQISEAPQFRSSP
GAIGSRPPNYTHQPQPHYNRYTNPNSSPRNDRYYRGCYRQVQSYSFPSPSGSSQDFVGPR
HLNQNQSRGVNHQPSNRQTNLLCDNFQRLSFQQDRGAGKRFDRRSSSGKYAKGNITITPV
IQEQVHKALKADEAIPAKVLAKKLHLPKKVVNQALYSLEPLKKASKQGLLPPEWTLYREN
SQAEARISAKPQSPPSLLSLSSNQHQSAEAKVDVEKEQETKEEDSDSESSSSCSSLESSA
SEDCQSSAIVGCQENPCASPADLELSSAMMADQKEKVLKYLFELGQTTALVLAKKLGLRS
AKQINPTIYDLEKQGDVIKNDTIPYKWELSPHRKERMERSLKAASIPQAGQMEVDVNRDQ
NEGGALPGLEPIPKLENWTQDQPQGKMTPSASLYEDNTNNESQWANDSIPDYLNAIRRHT
DAIKLAAEKGNTVGTVAVSLAAPPSQNLWAKLQEVRLKNPVSGLMEYAQYLGQSCEFLLL
DQSGPSHDPRFRMQVMLNGRLFPIAEASNKKVAKKDAAAATLRILIKEMQGGESTEDEDN
TTSMDRESDQLPDHSGSVENTQGGSASGGVEGAEGPRQPLSRSLPGGKNPVSVLMEYSQR
SGKPIEFIATGQTGPPHDPRFKYRVKVGENLFAESSAPSKKAARQLAAEEAVKELMADGK
LQLNKPLLPLGLSGDCDEGSSSGAACPSLPPLTADELRAAHEAGVGDLINHLNNNAVSGL
LEYARARGFAAEIRLVGQSGPPHEPKFTYQAKLGGRWFPPVCASNKKQGKQEAADAALRV
LIGEAERAARTGELIPSELPVSGSTLHDQIAMLSHQRFNALTTRIQHCLLGRKILATIVM
RRGEGLGTVVSLGTGNRCVKGEELSLKGETVNDCHAEIISRRGFIRFLYNELLKYYDGAD
DSIFEPADGNKLQLKSDITFHLYISTAPCGDGALFDKSCSETGDEVQGHSPLFENIKQGK
LRTKVENGEGTIPVESSDIVPTWDGIQHGERLRTMSCSDKILRWNVLGLQGALLTHFLHP
IYLKSITLGYLYSHGHLTRAVCCRLARDGEAFAQSLPHPFTLNHPEVGRVSVYDSTRHTG
KTKESSVNWSLPDQYNVEVLDGTKGKLDGNKQSVSRVSKSRLFCLFRSMCQKSNRADLLS
LPSYAQAKISATSFQLAKQHFFQALSVHGYGAWIGKPLEEKSFESVEGTGNNGACTSVEF
GGGRNEGAVDYKPAEA
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggtagaggagggtcttacaaagaacacccccagaggcataaacctccccac
ttgcaggtcaaggagaattactacagacagctctttccgagagctgacccagagcagata
ccaaatcaactttattccaacagccccggatgtccttccgtccccttaaggtccccgtcc
tctatccttccctctgctcccccgataccaaaccatattaatgtggccaattctggagct
tttaattgttctaattaccagaatctgggttttggtccgacaccaaactctttccaatat
aaacaggcagagttccttagaggacagatttcagaggcgccgcagtttagaagcagtcct
ggagcaataggcagcaggccacctaactatacacaccagccgcagcctcactataataga
tacacaaaccccaacagcagccccaggaacgacagatattacagaggatgctataggcaa
gtccagagttattcctttccgtctccttcaggatcgtctcaggactttgtaggtcctcga
cacctgaatcaaaaccagtcacgaggggttaaccaccaaccatccaacagacaaacaaac
ctcctgtgtgataattttcagagactgagtttccaacaagacaggggagctggaaaacgc
tttgacagacggtcttcatcagggaagtacgctaaaggtaatataacaataacgcctgtc
atacaggaacaagtgcacaaggctttgaaggcagatgaggctatacctgcaaaggtttta
gccaaaaaactgcacttgcccaagaaggtggtaaatcaggctctttactctttagaaccg
ttaaaaaaagcatccaaacaaggacttctgcctccagagtggactctgtatcgagaaaat
tcccaggctgaggcaagaatatcagctaaaccacagagccccccctcccttttgagtctc
agctctaatcagcatcaatcagctgaagctaaggttgacgtagaaaaggagcaagagacc
aaagaggaagactccgactccgaatctagttcttcttgctcttcattagagtcctctgcc
tctgaggattgccagtcctcagcaatagttggatgtcaagagaatccctgtgctagccca
gctgaccttgagttgagctctgcaatgatggcagatcagaaagagaaagttttgaaatat
ctctttgaattgggtcaaacaaccgctctcgtcttggcaaagaaactgggccttaggagt
gccaagcagatcaaccctaccatttacgatctggagaagcaaggcgacgttattaaaaat
gacaccatcccttacaaatgggagctgtctccccatcgcaaagagaggatggaaaggagc
ttgaaagccgcttccatcccccaagctggtcaaatggaggtggatgttaatagagatcag
aatgaaggaggagctttgccaggccttgaaccaatacctaagcttgagaattggacacaa
gatcaacctcaaggcaaaatgacgccctccgccagcctgtatgaagacaacacgaacaat
gagtcacagtgggcaaatgatagcatcccagattacctcaatgccatacggagacacaca
gatgccatcaaactggctgctgaaaagggtaatactgtaggaaccgttgctgtctctctg
gcggctcctccttcccagaatctttgggccaaattacaagaggtccgcttaaaaaaccca
gtcagtggccttatggagtatgcccagtatctgggtcaaagctgtgagttccttcttctg
gaccagagtggaccgtctcatgacccaagatttcgaatgcaagtgatgctcaatggaagg
ctgtttcctattgcggaggcttcaaataaaaaagtggctaaaaaggatgcagcggcggcc
actctgcgtatcctcatcaaagagatgcagggaggagagagcacagaggacgaagacaac
accaccagcatggaccgagagtctgaccaactccctgaccactctgggtctgttgaaaac
acacagggaggttcggcatctggcggagtggaaggggcggagggaccccgccagcccctg
tcccgctctctgcctggtgggaagaacccggtctctgtcctgatggagtacagtcagcgc
agtgggaagcccatcgaattcatcgccactgggcaaacaggcccaccgcatgacccacgg
ttcaagtacagagtgaaggtgggggaaaacttgtttgcagaatcatcagctccaagtaag
aaggcagctcgccagctggcagcagaggaagccgtcaaagagctaatggctgatggaaaa
ctgcaacttaacaagccactgctgcccctgggtctttctggtgactgtgatgaagggagc
tcttctggggccgcatgcccttctctgccacctcttactgcagatgagctgcgagcggcc
cacgaggcaggtgtcggggatctcatcaatcacctgaacaacaacgctgtgtctggcctg
ctggagtatgccagagcccgaggatttgctgctgagatccgcttggtgggccagtctggg
ccaccacatgagcccaagttcacctaccaggccaaactgggcggacgctggtttcctccg
gtttgcgcttccaacaagaagcagggaaagcaggaagcagcggatgccgctctgcgggtt
ctgattggagaagctgagagggcagctcgcacaggggagcttatccccagcgagctacca
gtgagcggcagcactttacatgaccagatagcgatgctgagtcaccagcgtttcaacgcc
ctgaccacgcgcattcaacactgccttttaggacgcaagattctggccaccatcgtcatg
agaagaggggaaggccttgggaccgttgtcagcctggggactggaaatcgttgtgtcaaa
ggggaggagttgagcttgaaaggggagaccgttaatgattgtcatgcggaaatcatctct
agaagaggatttattcggtttctgtacaacgagctactcaaatactatgatggcgcagat
gacagtatttttgaaccggcagacgggaataaacttcagctcaagtctgacatcaccttt
cacctttatatcagcacggcaccttgcggagatggcgctttgttcgacaagtcatgtagt
gagacgggagatgaagtccagggccactcgcctctatttgagaacatcaagcagggcaaa
cttcgaacgaaagtggagaatggtgagggaaccatcccagtggagtcaagtgacattgta
cccacttgggatggcattcagcatggtgaaaggctgcgaaccatgagctgcagcgataag
atcctgcgctggaacgtgcttggcctccagggggcactgctcacacatttcttgcatccc
atttacctgaagtcaatcacccttggttatctgtacagccacggtcatttgacccgtgct
gtctgctgtcgccttgccagagatggtgaagcctttgcacagagtctgccccatcccttc
acgctgaaccatcccgaggtgggaagagtgagtgtgtacgactccacgcgtcacacaggc
aagaccaaagagtccagtgtgaattggagccttccagaccagtacaatgtggaagtcctt
gatgggaccaaaggaaaactagatgggaacaaacagtcggtgtcccgggtctccaagtcc
cgtctgttctgcctgttccgctctatgtgccagaagtcaaatcgcgctgacctcctgtcc
ctgccctcctacgctcaggccaaaatatcagccacatccttccaacttgccaaacaacac
ttctttcaagctctcagcgtccacggctatggagcctggatcggcaagccgctggaagag
aagagcttcgagtctgtggagggaacgggaaacaacggagcgtgcacctctgtggagttt
gggggcggtagaaacgagggggcagtggattacaagccggcagaggcgtag
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