Oncorhynchus masou masou (cherry salmon): 135520708
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Entry
135520708 CDS
T10723
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase-like isoform X1
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
omm Oncorhynchus masou masou (cherry salmon)
Pathway
omm04622
RIG-I-like receptor signaling pathway
omm04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
omm00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
135520708
04623 Cytosolic DNA-sensing pathway
135520708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omm03041
]
135520708
Enzymes [BR:
omm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
135520708
Spliceosome [BR:
omm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
135520708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
Motif
Other DBs
NCBI-GeneID:
135520708
NCBI-ProteinID:
XP_064802529
LinkDB
All DBs
Position
29:complement(80201633..80221049)
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AA seq
1389 aa
AA seq
DB search
MSRGRGGPPIEHYHRPPLPQLQAKQQYYRAGPLGFHPRASPQQAPHPNVHSYLGPVPPLV
PPSAHSQPLYPSAPPPPGHSPALNQQSSCPSGPNSFRQQQVHFLRGQNTEAPQFRVSPRG
GAQSLGRGGPNGLYNESNQTQAGYSRYSQNSCRGRGGYSSERGRGNGRDFGYPPSQGPPR
GPTGPRFWNQKQTSTQKQGFNRQWSLHADCADGPSFSEGFQTLSLDRERSYRGRVDRGDS
FDKASVGSSNNSNNKSVPTFQPPDIREQVLQALADLSPGEKLQAKCLAKTLRLPKKFINQ
ALYGLERDKKASKHGESPPEWTVYVEPQEEPESRDSDPESPRSQPREHSVESQERPSEED
CSHFLSVKEEDVVINAEIQQIEAQGPEGDREEDYYVESDSHSSSSEPSESYRQHSQSQTQ
QPSINSSSNEELDLDLDESDMADCGSNQKELILQYLLEAGEATALVIAKNLGLRGAKQVN
PTLYAMEKQGDVNRNAEVTPHIWELSVHRRERMERSLKAERSAPAKVEGVGSGFQAVPPG
LECLEANAEAEDESNGGQWATDDIPEFLNAISRDGGGTVAVSLAAPPPQNLRAKLQEVRA
KNPVSGLMEFAQYQGHNCEFLLLDQSGPSHDPRFRMQVMLDGRLFPVAEASNKKVAKKDA
AAATLRILLREIEGGGAEEGLTAGVDQAVDPTSDVPVSLKCVRVCVEEVVEGPPQALSRS
LPGGKNPVSMLMEYSQRTGNPIEFINTGQEGPPHDPRFMFRVKIGESLCAESSAPSKKAA
RQLAAEEAVKELMADGRLQLNKPQFPLCLSGDEGGFMPACPSLPPLTEEELRSAHEAGVG
DLISHLNNNAVSGLLEYARARGFAAEIRLVGQSGPPHEPKFTYQAKLGGRWFPPVCASNK
KQGKQEAADAALRVLIGEAEKAARTGELTPAELPLSGGTIHDQIAMLSHQRFNALTTRIQ
HSLLGRKILATIVMKRGEGLGTVVSLGTGNRCVKGEELSLKGDTVNDCHAEIISRRGFIR
FLYAELLKHCEGSEDSIFEPAEENKLRIKPDTTFHLYISTAPCGDGALFDKSCSEDAGDG
QGHQPLFENAKQGKLRTKVENGEGTIPVESSTIVPTWDGIQHGERLRTMSCSDKILRWNV
LGLQGALLSHFLHPIYLASITLGYLYSHGHLTRAVCCRLARDGEAFSKSLPAPYTLNHPE
VGRVSVYDSTRHTGKTKESSVNWSQPDHITVEVLDGTKGKLDGYAPRTTTRTRPSDLIHP
HPDSSTSPKLDVSRVSKSNIFRQFRSLCQQCGRQDLLALPSYAQAKMAAMSFQVAKQQFF
DALGSHGYGAWIGKPLEEKSFDEAAASDGQGAGSVANSNQGYNNNNSYGSTTTDYNSSQW
GSSAYTQAM
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggacgaggagggccccccatagagcattaccaccgaccccctctcccccaa
ctgcaggctaagcaacaatactacagagctggacccctgggatttcaccccagagcctcc
ccgcaacaggccccacacccaaacgtccattcatacctgggcccagttccccctctagta
ccacccagtgctcactctcagcctctctacccctctgcccctcccccacccggtcacagc
ccagccctgaatcagcagagctcttgtcccagtggtcctaactccttcaggcagcagcag
gtccacttcctgaggggacagaacactgaggctccccagtttagggtgagccccagagga
ggggcgcagagcttgggtagagggggaccgaacggactctataacgaatcgaaccagacc
caggcagggtacagcaggtactcccaaaacagttgtagggggagagggggatacagcagc
gagcgaggcagagggaacggtagggactttgggtacccgcccagtcagggaccccctaga
ggaccaaccggccctagattctggaaccagaagcagacttcaacacaaaagcaaggcttc
aacagacagtggagtcttcatgcagactgtgctgacgggccgtctttctcagaaggcttt
cagactttatccttagacagagagaggtcctacagaggaagagttgaccgaggcgacagc
tttgacaaagcttctgttggtagtagtaataattcaaacaacaagagtgtccctacattt
cagccacccgacatccgagagcaagttttgcaagccttggcagatttgagccctggtgag
aagctacaagcaaagtgtttggcgaaaacgctgcggttgcccaaaaagtttatcaaccag
gccctttacgggctcgagcgtgataagaaagcttcaaaacacggtgaaagtcctccagag
tggactgtctacgtagaaccacaggaagaaccggaaagtagagattctgatccggaaagc
ccacgttcccaaccgagggaacattctgtggagtcacaggaaaggccttcggaagaagat
tgctctcacttcctgtctgtgaaggaggaggacgttgtcatcaacgctgagatccagcaa
attgaagcgcagggtcctgagggcgacagagaagaagattactacgtagaatctgattca
cactcctcttcctcagaaccatctgagtcatatcggcaacattcccagtcccaaacccaa
caacccagtatcaacagcagcagtaacgaagagcttgacctagaccttgacgagagcgac
atggcggactgcggcagtaatcagaaggagttgatcctgcagtatctgctggaggcagga
gaggccacggccctggtgattgccaagaacctgggcctgaggggcgccaagcaggtcaac
cccaccctatacgccatggagaagcagggcgacgtgaaccgcaacgcagaggtgacccct
cacatctgggagctatctgtccatcgcagggagaggatggagaggagcctcaaggccgag
cgcagcgcccctgcaaaggtcgaaggagtggggtccggattccaggcggtgccacctgga
ttggagtgtctagaggccaacgctgaggcggaggacgagtcgaacggagggcagtgggcg
accgacgatatccccgaattcctcaacgccatcagccgggatggaggggggacagtagca
gtctccctggcagcgcccccacctcagaacctccgtgccaaactccaggaggtgagggcc
aagaaccccgtcagcggcctgatggagtttgcccagtaccagggacacaattgcgagttc
ctgctcctcgaccaatcagggccttcacatgaccccagattccgtatgcaggtcatgctg
gatggcaggttgtttcctgttgctgaggcatctaataaaaaggtggctaagaaagatgct
gccgcagcaaccctcaggattctgctgcgtgagatagaggggggaggggctgaggagggg
ctcactgcaggggtggaccaggccgtggaccccacctctgacgtccctgtaagtctgaag
tgtgttcgtgtgtgtgtggaggaggtggtggagggtccgccccaggccctgtcccgttcc
ctgccggggggtaagaaccccgtgtccatgctgatggagtacagtcagcgcactggaaac
cccatcgagttcatcaacactggacaggagggcccacctcacgacccacggttcatgttc
agggtgaagatcggggaaagcctgtgtgctgagagctcagcccccagtaagaaggctgcc
aggcagctggctgcagaggaggcagtcaaggagttaatggccgacgggagactgcagctc
aacaagccccagtttcccctgtgtctgtctggtgatgaagggggcttcatgcccgcttgc
ccctccctgcccccgctgacagaggaggagctgcgttctgcccacgaggcgggggttggt
gacctcatcagccacctaaacaacaacgctgtgtcaggtctgctggagtacgcccgggcc
aggggcttcgctgcagagatacgactggttgggcagtcaggaccaccgcacgagcccaag
tttacctaccaggctaaactagggggtcgctggttccctcctgtctgtgcttctaataag
aagcaagggaaacaggaagcagctgatgcagctctgagggttctgattggagaggcagag
aaggctgcccgcaccggggaactaacccctgcagagctgccactgagtggtgggacaatc
catgaccagatcgccatgttgagtcaccagcgcttcaacgcactcaccacacgcatacag
cacagtcttctgggaaggaagatcctcgccaccatcgtcatgaagaggggggaagggctg
gggaccgtggtcagtctgggaacaggaaatcgctgtgttaaaggggaggagctgagtctt
aaaggggataccgttaatgactgccacgcagaaatcatctccaggagagggtttatcagg
tttctatatgctgagttgctgaagcactgtgaaggatcagaggacagcatatttgagcca
gctgaggagaacaagctccggatcaaacctgacaccaccttccacctctatatcagtact
gctccgtgtggagacggggcgttgtttgataagtcgtgcagcgaggacgcgggggacggc
cagggccaccagcccctgtttgagaacgccaagcagggcaagctgcgcaccaaggtggag
aatggtgagggtaccatcccggtagagtcatcaaccatcgtacccacctgggacggcatc
cagcatggcgagcgtctgaggaccatgagctgtagcgacaagatccttcgctggaacgtc
ctgggtctgcagggagccctgctctcccacttcctccatcctatctacctggcttcaatc
accctgggctacctgtatagccatggccacctgacacgtgctgtctgctgccgattggcc
agagacggcgaagccttctccaagagtctacctgctccctacacacttaaccaccccgag
gtgggcagggtgagtgtgtatgactcgacgcgtcacacagggaagaccaaggagtccagc
gtgaactggagccagccagaccacatcactgtggaggtgctggatgggaccaagggcaaa
ctggacgggtacgcaccccgcaccacaactagaaccagaccctcagacctcatccaccct
catccagatagcagcaccagccccaaactggacgtgtcgcgggtctccaagtccaacatc
ttccgtcaattccggtcgttatgccaacagtgcggacgccaggacctgctggctctcccg
tcttacgcccaagccaagatggccgccatgtccttccaggtcgcaaagcagcagttcttc
gatgcgctcggtagccatggttacggtgcctggattggcaagccattggaggagaagagc
tttgacgaagcggcggcctccgatggccaaggggcaggaagtgttgctaatagcaaccag
ggatacaacaacaacaatagctatggaagcacaaccactgactataacagcagccagtgg
ggtagtagtgcgtacacacaggccatgtag
DBGET
integrated database retrieval system
