Oncorhynchus nerka (sockeye salmon): 115140749
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Entry
115140749 CDS
T07952
Name
(RefSeq) complement C1r subcomponent-like
KO
K01330
complement component 1, r subcomponent [EC:
3.4.21.41
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115140749
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115140749
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115140749
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.41 complement subcomponent C_overbar_1r_
115140749
Peptidases and inhibitors [BR:
one01002
]
Serine peptidases
Family S1: chymotrypsin family
115140749
Membrane trafficking [BR:
one04131
]
Endocytosis
Phagocytosis
Opsonins
115140749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
CUB
Sushi
FXa_inhibition
EGF_CA
cEGF
EGF_3
CDCP1_CUB_6
Trypsin_2
EGF
DUF4215
Motif
Other DBs
NCBI-GeneID:
115140749
NCBI-ProteinID:
XP_029534914
LinkDB
All DBs
Position
LG14:complement(390164..398147)
Genome browser
AA seq
707 aa
AA seq
DB search
MDWTHPFIWLLCVSVCECWRLARSLPALHGVVQSPQFPQPYPAALSQQWDLSVPEGYQLQ
LSFTHLDIEPSADCYYDSLTVLYDKKVLAKFCGQENSADGHHPGNRPLLSPGNRLTLVLQ
TDDTNPEPHQHLGFSAHYQAKDIDECSAPDPEDGSGPLCSQICHNTLGSYMCSCRHGYEL
RPDQRTCVLSCGGGIFDEPEGTLSSPGYPDPSPHGLACQYVISVEPGFIVTLNFTDSFHI
EHIDTQNGPSCLYHWLQVSIPDKEPQKLCGVKSPALMPTNSYTVQLDYHTDWAGLSQGWS
LHYTTQRVQCASPSSITNGRVTPNFPQYYYRDYIQVRCDPGYKLMMDGREIKSYASMCQK
NGQWHLSLPECHIIDCGEPEELLNGGVRFISGSQNQHLSVIQYHCNEPFYSLLGGATVSY
TCAADRTWRDNLDTPVIPSCIPVCGQPTMSISGFQRIMGGDNAPDKTIPWQVLLSVDGGR
GGAMVIGDRWIMTAAHNLVQQGKLVLKEKVRVFVGDNDAEKLAKLTPLGVASLHPHPEYK
NTEGANYNHDIALIKLQQPLTFHAAIMPLCLPPKNATYNIGQIGMVSGFGMKEDEIIAND
LRYIRLPVVKEDECQDSVNRAKAAKPTEKIPVLTDNMFCAGVPEGGKDSCTGDSGGAYVL
KDSITKRFWAAGIVSWGVGCGQTGRYGVYTRVAKYISWINKTMEDNK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggactggacccatccgttcatctggctgctgtgtgtgtctgtgtgtgagtgttggcgg
ttggcccggtccctgccagccctacatggggtagtccagtccccccagttcccccagccg
taccctgctgccctgtcacaacagtgggacctcagtgtacctgagggctaccagctccag
ctcagcttcactcacctggacatcgagccgtcagccgactgctactacgactccctcacg
gttttatatgacaagaaggtccttgcaaagttctgtggtcaggagaattctgctgatgga
catcacccaggcaaccggccactcttgtctccaggcaacaggctcaccctggtccttcag
acagacgacacgaaccctgagccacaccagcacctcggcttctctgcccattatcaggcc
aaagacatagatgagtgttcagctccagaccctgaggatggttctggtccactctgctcc
cagatctgccacaacaccctgggctcttacatgtgctcctgtcgccatggctacgagctc
cgccctgaccagcgcacctgtgtcttgtcctgtggtgggggtatatttgatgaaccagag
gggactctgtccagcccaggctaccctgacccatcaccccacggcctggcctgtcagtat
gtcatctctgtggagcctgggttcatcgtcaccctcaacttcactgacagcttccacata
gagcacatagacacccagaatggacccagctgcctctaccactggctacaggtgtccatc
cccgacaaggaaccccagaagctgtgtggagtgaagagtcctgcactaatgcccactaac
tcttacactgtccagctagactaccacactgactgggctggtctgagccagggctggagc
ctgcactacactactcagagggtgcagtgtgcttcacccagttctatcaccaatggaaga
gtcaccccaaactttccccagtactattacagagactacatccaagtccgctgtgaccct
ggctacaaactaatgatggatggcagagagatcaagagctatgcctccatgtgtcaaaag
aatggacagtggcacctctccctccctgagtgccacataattgactgtggggaacctgaa
gaactgttgaatggaggcgtaaggttcatatctggctctcagaaccagcacctctccgtc
attcagtaccactgcaatgaaccattctactcactccttggaggagcaactgtgagctac
acttgtgcagcagatagaacatggagagacaaccttgacacccctgtcattccctcatgt
atcccagtctgtggtcagcccacaatgtccatctcaggctttcagaggatcatgggggga
gacaatgccccagacaaaaccatcccctggcaggtgctgctcagtgtggacggaggcaga
ggaggggccatggtgatcggggaccgctggatcatgactgcagctcataacctggtgcag
cagggcaaacttgtgctaaaggagaaagttcgggtttttgtgggagacaatgatgcagaa
aaactagcaaagctcacccctcttggagtcgcctccctccacccccaccctgaatacaaa
aacacagagggtgcaaactacaatcatgacatcgccctgataaaactccaacaaccactc
acattccacgctgccatcatgccattgtgtctgccaccaaagaacgctacttacaacatt
ggccagattggtatggtgtcaggctttggcatgaaagaagatgaaatcattgccaacgat
ctcaggtacatacgcctaccagtagtgaaagaggatgagtgccaagactctgtcaacaga
gcaaaagcagcaaagccaacagagaagatccctgttctgacagacaacatgttctgtgcc
ggagtacctgaggggggcaaggactcctgtacgggggacagtggaggggcgtacgtcttg
aaggatagtattactaaacggttttgggctgcaggtattgtcagttggggtgtgggttgt
gggcagactggtagatatggagtgtacacccgtgtggctaaatacattagctggatcaac
aaaaccatggaggacaataagtaa
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