KEGG   PATHWAY: oor03022
Entry
oor03022                    Pathway                                
Name
Basal transcription factors - Orcinus orca (killer whale)
Class
Genetic Information Processing; Transcription
Pathway map
oor03022  Basal transcription factors
oor03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Orcinus orca (killer whale) [GN:oor]
Gene
101269356  GTF2A1L; TFIIA-alpha and beta-like factor [KO:K03122]
101269987  TBP; TATA-box-binding protein [KO:K03120]
101269998  MNAT1; CDK-activating kinase assembly factor MAT1 isoform X3 [KO:K10842]
101270061  ERCC3; general transcription and DNA repair factor IIH helicase subunit XPB [KO:K10843] [EC:5.6.2.4]
101271033  TAF4B; transcription initiation factor TFIID subunit 4B isoform X3 [KO:K03129]
101271561  GTF2H1; general transcription factor IIH subunit 1 [KO:K03141]
101272427  [KO:K03126]
101272477  TAF13; transcription initiation factor TFIID subunit 13 [KO:K03127]
101274176  TAF8; transcription initiation factor TFIID subunit 8 isoform X2 [KO:K14649]
101274795  CCNH; cyclin-H isoform X2 [KO:K06634]
101275003  [KO:K03123]
101275834  TAF11; transcription initiation factor TFIID subunit 11 isoform X1 [KO:K03135]
101276369  TAF9B; transcription initiation factor TFIID subunit 9B isoform X3 [KO:K03133]
101276927  GTF2I; general transcription factor II-I isoform X7 [KO:K03121]
101276972  GTF2A1; transcription initiation factor IIA subunit 1 isoform X2 [KO:K03122]
101278846  TAF3; transcription initiation factor TFIID subunit 3 [KO:K14650]
101278981  GTF2A2; transcription initiation factor IIA subunit 2 [KO:K03123]
101279073  GTF2F1; general transcription factor IIF subunit 1 isoform X2 [KO:K03138]
101280174  TAF5L; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X4 [KO:K03130]
101280374  TAF5; transcription initiation factor TFIID subunit 5 isoform X1 [KO:K03130]
101280632  [KO:K03139] [EC:5.6.2.-]
101281977  TAF15; TATA-binding protein-associated factor 2N isoform X2 [KO:K14651]
101282027  TBPL1; TATA box-binding protein-like 1 [KO:K03120]
101282755  GTF2H5; general transcription factor IIH subunit 5 [KO:K10845]
101283039  TAF7L; transcription initiation factor TFIID subunit 7-like [KO:K03132]
101283218  TAF6; transcription initiation factor TFIID subunit 6 isoform X3 [KO:K03131]
101283350  TAF1; transcription initiation factor TFIID subunit 1 isoform X9 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
101283455  TAF6L; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1 [KO:K03131]
101283964  TAF2; transcription initiation factor TFIID subunit 2 isoform X3 [KO:K03128]
101284110  [KO:K03132]
101284478  TAF12; transcription initiation factor TFIID subunit 12 isoform X2 [KO:K03126]
101284713  TAF4; transcription initiation factor TFIID subunit 4 isoform X1 [KO:K03129]
101285029  TBPL2; TATA box-binding protein-like 2 [KO:K03120]
101285625  GTF2E1; general transcription factor IIE subunit 1 [KO:K03136]
101286069  GTF2B; transcription initiation factor IIB [KO:K03124]
101286646  [KO:K03132]
101287308  CDK7; cyclin-dependent kinase 7 isoform X1 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
101287720  ERCC2; general transcription and DNA repair factor IIH helicase subunit XPD isoform X4 [KO:K10844] [EC:5.6.2.3]
101287806  TAF9; transcription initiation factor TFIID subunit 9 [KO:K14535]
101288078  GTF2E2; transcription initiation factor IIE subunit beta isoform X1 [KO:K03137]
101288380  [KO:K03120]
101288830  GTF2F2; general transcription factor IIF subunit 2 [KO:K03139] [EC:5.6.2.-]
101289421  GTF2H3; general transcription factor IIH subunit 3 isoform X1 [KO:K03143]
101289744  TAF10; transcription initiation factor TFIID subunit 10 [KO:K03134]
101290040  [KO:K03142]
117198890  GTF2H4; general transcription factor IIH subunit 4 isoform X1 [KO:K03144]
117203559  [KO:K03127]
125964116  [KO:K03132]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
oor03020  RNA polymerase
oor03420  Nucleotide excision repair
KO pathway
ko03022   

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