Ochotona princeps (American pika): 101516431
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Entry
101516431 CDS
T07609
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi01521
EGFR tyrosine kinase inhibitor resistance
opi04010
MAPK signaling pathway
opi04014
Ras signaling pathway
opi04015
Rap1 signaling pathway
opi04020
Calcium signaling pathway
opi04072
Phospholipase D signaling pathway
opi04151
PI3K-Akt signaling pathway
opi04510
Focal adhesion
opi04518
Integrin signaling
opi04540
Gap junction
opi04630
JAK-STAT signaling pathway
opi04810
Regulation of actin cytoskeleton
opi05165
Human papillomavirus infection
opi05200
Pathways in cancer
opi05206
MicroRNAs in cancer
opi05214
Glioma
opi05215
Prostate cancer
opi05218
Melanoma
opi05230
Central carbon metabolism in cancer
opi05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101516431 (PDGFRB)
04014 Ras signaling pathway
101516431 (PDGFRB)
04015 Rap1 signaling pathway
101516431 (PDGFRB)
04630 JAK-STAT signaling pathway
101516431 (PDGFRB)
04020 Calcium signaling pathway
101516431 (PDGFRB)
04072 Phospholipase D signaling pathway
101516431 (PDGFRB)
04151 PI3K-Akt signaling pathway
101516431 (PDGFRB)
09133 Signaling molecules and interaction
04518 Integrin signaling
101516431 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101516431 (PDGFRB)
04540 Gap junction
101516431 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
101516431 (PDGFRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101516431 (PDGFRB)
05206 MicroRNAs in cancer
101516431 (PDGFRB)
05230 Central carbon metabolism in cancer
101516431 (PDGFRB)
05231 Choline metabolism in cancer
101516431 (PDGFRB)
09162 Cancer: specific types
05214 Glioma
101516431 (PDGFRB)
05218 Melanoma
101516431 (PDGFRB)
05215 Prostate cancer
101516431 (PDGFRB)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101516431 (PDGFRB)
09176 Drug resistance: antineoplastic
01521 EGFR tyrosine kinase inhibitor resistance
101516431 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
opi01001
]
101516431 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
opi04090
]
101516431 (PDGFRB)
Enzymes [BR:
opi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
101516431 (PDGFRB)
Protein kinases [BR:
opi01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
101516431 (PDGFRB)
CD molecules [BR:
opi04090
]
Proteins
101516431 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
ig
I-set
Ig_2
V-set
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
TrmE_N
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
101516431
NCBI-ProteinID:
XP_004587597
LinkDB
All DBs
Position
3A:23711848..23745531
Genome browser
AA seq
1106 aa
AA seq
DB search
MWLPAVMPAPGLKGQSLLLSLLLLLGLQASQGLVIIPPGPELVLNISSTFTLTCSGSAPV
VWERMSQEPWQEVTVDEDGTFSSMLTLVNVTGADTGEYFCTYNGSQGLDPSERKRLYVFV
PDPTMSFLPTEPEELFIFLTEVTETTIPCRVTDPRLVVTLHEKKEDVPLPIPYDHQRGFS
GTFEDKTYVCKTTVGGREVDSDAYYVYSLQVSSINVSVNAVQTVVRQGENITIMCIVTGN
EVVNFEWRYPRQESGRLVEPVTDFLFDVPSHIRSILHIPNAETGDSGTYVCNVSESVNDH
RDEKAINVTVVESGYVRLLGELGALQFADLHRSRTLQVVFEAYPPPTVLWFKDNRTLGDS
SAGEIALSTRNVSETRYVSELTLVRVKVAEAGKYTMRAFHEDAEAQLSFQLQVNVPVRVL
ELSESHPASGEQVVRCRGRGMPQPNVTWFTCRDLKRCPSELPPTPLGNRSEDESQLETNV
TYWVEEQEFEVVSTLRLRQVDQPLSVRCMLRNLRDYDSKEVTVVPHSLPFKVVVISAILA
LVVLTIVSLIILIMIWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWELPRDQL
VLGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGP
HLNVVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQHHSDKRRPPSAELYSNAL
PIGLCLPSHVSLTGESDGGYMDMSKDESVDYVPMLDMKGDVKYADIESSNYMAPYDNYVP
SAPERTYRVTLINESPVLSYTDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLV
KICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLG
GTPYPELPMNEQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLLER
LLGEGYKKKYQQVDEEFLRSDHPAILRSQARLPGFHGLRSPLDTSSVLYTAVQPNESDND
YIIPLPDPKPEVADEGPLEGSPSLASSTLNEVNTSSTISCDSPLEPQEEAEAEPQLESCV
ESEPKVEQLLDSGCFGMQAEVEDSFL
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttccggctgtgatgccagctccggggctcaaaggccagtcgctgctgctgtcc
ctgctattactgctgggacttcaggcctcccagggcttggtcatcattcctccagggccg
gagctggtccttaacatctccagcaccttcactctgacctgctcgggttccgctccagtg
gtgtgggaacgtatgtcccaggagccctggcaggaagtgactgtggatgaggacggcacc
ttctccagcatgctgaccctggtcaacgtcactggggcggacacgggcgagtacttctgc
acttacaatggctcccaggggctagaccccagcgagcggaagcggctgtacgtctttgtg
ccagatcccaccatgagcttcctccccacggaacccgaggagctgttcattttcctcaca
gaggtgaccgagaccaccattccgtgccgagtgacggacccacggcttgtggtgacgctg
cacgagaagaaggaggacgtcccactgcccatcccctatgaccaccagcgtggcttctca
ggcacctttgaggacaagacctacgtctgcaagaccaccgtcgggggcagggaagtggac
tcggatgcctactatgtttacagcctgcaggtgtcatccataaatgtctcggtgaacgcg
gtgcagactgtggtccgccagggtgagaacatcaccatcatgtgcattgtgaccggcaac
gaggtggttaactttgagtggcggtacccccgccaggagagtggacggctagtggagcca
gtgactgacttcctgtttgatgtaccctcccacatccgctccattctgcacatccccaat
gctgagacgggcgactcgggcacctacgtgtgcaacgtatcagagagcgtgaatgaccac
cgggatgaaaaggccatcaatgtcactgtggttgagagtggctatgtgcggctgctggga
gagctgggcgcgctgcaattcgctgacctgcaccggagccgtacactgcaggtggtattc
gaggcctaccctccgcccactgtcctgtggttcaaggacaaccgcaccctgggcgactcc
agtgccggcgagattgccctatccacacgcaatgtgtcggagacccggtatgtgtcagag
ctgacactggtgcgggtgaaggtggcagaggccggcaaatacaccatgcgtgctttccac
gaggatgccgaggcccagctctccttccaactgcaggtcaatgtccctgtgcgtgtgctg
gagctgagtgagagccatcccgccagtggggagcaggtagtccgctgtcgcggccgaggc
atgcctcagccaaacgttacctggttcacctgcagagacctcaaaaggtgcccctctgag
ctgccgcccacaccgctgggaaaccgctcagaggatgagagccagctggagaccaacgtg
acgtactgggtggaagagcaggagtttgaggtggtgagcacgctgcgcctgcgccaggtg
gaccagcccctgtctgtgcgctgcatgctgcgcaatctgcgggactacgacagcaaggag
gtcaccgtggtgccacactctctgcccttcaaagtggtggtgatctcggccatcctggcc
ttggtggtgctcacaatcgtctccctcatcatcctcatcatgatctggcagaagaagcca
cgctacgagatccggtggaaagtgattgagtctgtgagctctgatggccacgagtacatc
tatgtggatcccatgcagctgccctatgactccacgtgggagctgccgagggaccagctt
gtgcttggacgcaccctcggctctggggccttcgggcaggtcgtggaagccacggctcac
ggcctgagtcattcgcaggccaccatgaaggtggccgtgaagatgctgaaatccacagcc
cggagcagtgaaaagcaagccctcatgtcggagctgaagatcatgagtcaccttgggcct
cacctgaatgtggtcaacctgctgggggcctgcaccaaaggaggccccatctacatcatc
accgagtactgccgctacggcgacctggtggactacctgcaccggaacaagcacactttc
ctgcagcaccactccgacaagcgccgcccgcccagcgccgagctctacagcaatgccctg
cccattggcctgtgcctgcccagtcatgtgtcgttgacgggtgagagtgacggtggctac
atggacatgagtaaggatgagtcggtggactacgtgcccatgctggacatgaaaggagac
gtcaaatacgcagacatcgaatcttccaactacatggccccttatgataactacgtcccc
tctgcccccgagaggacctaccgggtaactttgatcaatgagtcccctgtgctcagctac
acggacctcgtgggcttcagctaccaggtggccaatggcatggagttcctggcctctaag
aattgcgtccaccgagacctggcagccaggaacgtgctaatctgtgagggcaagctagtc
aagatctgcgactttggcctggctcgagacatcatgcgggactcgaactacatctccaaa
ggcagcaccttcctgcctctgaaatggatggccccagagagcatcttcaatagcctctac
accacgctgagcgacgtgtggtcctttgggatcctcctctgggagatcttcaccctgggt
ggcacgccgtacccagaactgccgatgaacgaacagttctacaacgccatcaagcggggc
taccgtatggcccagcctgcacatgcctctgatgagatctatgagatcatgcagaagtgc
tgggaagagaagtttgagatccggccccctttctcccagctggtgctgcttctcgagaga
ctgctgggcgagggttacaaaaagaagtaccagcaagtggatgaggagtttcttaggagc
gaccacccagcaatcctcaggtctcaggctcgcttgcctgggttccatggccttcggtcc
cccctggacaccagctctgtcctctacacggctgtgcagcccaacgagagtgacaacgac
tacatcatccccctgccagaccccaaacccgaggttgctgatgagggtcccctggagggc
tcccccagtcttgccagctccaccctgaatgaagtcaacacatcttctaccatctcctgc
gacagccccctggagccccaagaagaagcagaggctgagccacagctggagtcctgcgtg
gagtctgagcccaaagtggaacagctgctggattctggctgcttcgggatgcaggctgaa
gtggaggacagcttcctgtga
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