Ochotona princeps (American pika): 101517612
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Entry
101517612 CDS
T07609
Symbol
RB1
Name
(RefSeq) retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
opi
Ochotona princeps (American pika)
Pathway
opi01522
Endocrine resistance
opi04110
Cell cycle
opi04218
Cellular senescence
opi04934
Cushing syndrome
opi05160
Hepatitis C
opi05161
Hepatitis B
opi05163
Human cytomegalovirus infection
opi05165
Human papillomavirus infection
opi05166
Human T-cell leukemia virus 1 infection
opi05167
Kaposi sarcoma-associated herpesvirus infection
opi05169
Epstein-Barr virus infection
opi05200
Pathways in cancer
opi05203
Viral carcinogenesis
opi05207
Chemical carcinogenesis - receptor activation
opi05212
Pancreatic cancer
opi05214
Glioma
opi05215
Prostate cancer
opi05218
Melanoma
opi05219
Bladder cancer
opi05220
Chronic myeloid leukemia
opi05222
Small cell lung cancer
opi05223
Non-small cell lung cancer
opi05224
Breast cancer
opi05225
Hepatocellular carcinoma
opi05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101517612 (RB1)
04218 Cellular senescence
101517612 (RB1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101517612 (RB1)
05207 Chemical carcinogenesis - receptor activation
101517612 (RB1)
05203 Viral carcinogenesis
101517612 (RB1)
09162 Cancer: specific types
05212 Pancreatic cancer
101517612 (RB1)
05225 Hepatocellular carcinoma
101517612 (RB1)
05226 Gastric cancer
101517612 (RB1)
05214 Glioma
101517612 (RB1)
05220 Chronic myeloid leukemia
101517612 (RB1)
05218 Melanoma
101517612 (RB1)
05219 Bladder cancer
101517612 (RB1)
05215 Prostate cancer
101517612 (RB1)
05224 Breast cancer
101517612 (RB1)
05222 Small cell lung cancer
101517612 (RB1)
05223 Non-small cell lung cancer
101517612 (RB1)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
101517612 (RB1)
05161 Hepatitis B
101517612 (RB1)
05160 Hepatitis C
101517612 (RB1)
05163 Human cytomegalovirus infection
101517612 (RB1)
05167 Kaposi sarcoma-associated herpesvirus infection
101517612 (RB1)
05169 Epstein-Barr virus infection
101517612 (RB1)
05165 Human papillomavirus infection
101517612 (RB1)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
101517612 (RB1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
101517612 (RB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
opi01009
]
101517612 (RB1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101517612 (RB1)
Protein phosphatases and associated proteins [BR:
opi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101517612 (RB1)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
101517612 (RB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
101517612
NCBI-ProteinID:
XP_004577539
LinkDB
All DBs
Position
8:complement(23388166..23511689)
Genome browser
AA seq
925 aa
AA seq
DB search
MPPKTPRRAVAAATAAVEPPAPPPPPEEDAERDSGPEDLPLARLEFEETEDPDFTALCQK
LKIPDHVRERAWLTWEKISSANGASGGYNQKKKKLWGICIFIAAVDLDDMPFTFTELQKS
IEISVYKFFDLLKEIDTSTKVDSAMSRLLKKYNVLCALYSKLERTCELIYLAQPSTSLST
EINSLLVLRVSWITFLLAKGEVLQMEDDLVISFQLMLCVLDYFIKLSPPALLKEPYKTAV
IPINGSPRTPRRGQNRSARTAKQQEQDSRIIDMLCKEHDCNIDEVKNVYFKNFIPFMNSL
GIIASNELPEVESLSKRYEEMYLKNKDLDARLFLDHDKTLQTDSIDSFEVQRTPRKNHHE
EEINMIPPPTPVRTVMNTIQQLVMILNSASDQPSENLISYFNNCTVNPKENILKRVKDVG
IIFKEKFAKAVGQGCVDIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFH
MSLLACALEVVMATYSRNTSQNLDSGTNLSFPWILSVLNLKPFDFYKVIESFIKAEANLT
REMIKHLERCEHRIMESLAWLSDSPLFDLIKQSKDREGPADHFESSCPLNLPLQNNHTAA
DMYLSPMRSPKKKSSTTRVNSTANVEPQATSAFQTQKPLKSTSLSLFYKKVYRLAYLRLN
TLCARLLSEHPELEHIIWTLFQHTLQNEYDLMRDRHLDQIMMCSMYGICKVKNIDLKFKI
IVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSVFMQKLKTNILQYASTRPPTLSPIP
HIPRSPYKFSSSPLRLPGGNIYISPLKSPYKISEGLPTPTKMTPRSRILVSIGESFGTSE
KFQKINQMVCNSDRVLKRSAEGSNPPKPLKKLRFDIEGTDEADGSKHLAGESKFQLKLAE
MTSTRTRMQKQKMNDSMDTSNKEEK
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaaaaccccccgaagagcggtcgctgccgctaccgccgccgtggaaccccca
gcgccgccgccccctcctgaggaggacgcggaacgggacagtggtcccgaagacctgcct
ctggccaggcttgagtttgaagaaactgaagaccccgattttacagcattatgtcagaaa
ttaaagataccagatcatgtcagagaaagagcttggttaacttgggagaaaatttcatct
gctaatggagcatcgggaggttataatcaaaagaaaaagaaactgtggggaatctgtatc
ttcattgcagcagttgaccttgatgacatgccattcacttttactgagctacaaaaaagc
atagaaataagtgtctataaattcttcgacttactaaaagaaattgatacaagtaccaaa
gttgatagtgctatgtcaagactgttgaagaagtataatgttttgtgtgctctctacagc
aagttagaaaggacatgtgagctaatatatttggcacaacccagtacttcgttatctact
gaaataaattctctgttggtgctaagagtttcttggatcacatttttactagccaaagga
gaggtcttgcaaatggaagatgacctggtgatctcatttcaattaatgttgtgtgttctt
gactattttatcaaactttcacctcctgcattgctcaaagaaccatataaaacagctgta
atacctattaatggctcacctcgaacacccagaagaggtcagaacagaagtgcccggaca
gccaagcaacaagaacaagattcaagaattattgacatgctctgtaaagaacatgattgt
aatatagacgaggtcaaaaatgtttatttcaaaaattttattccatttatgaattctctt
ggaattatagcttctaatgaacttccagaggttgaaagtctctctaaacgatatgaagaa
atgtatcttaaaaacaaagatctagatgcaagattatttttggatcatgataaaactctc
cagactgattctatagacagttttgaagtgcagagaacaccaagaaaaaatcatcatgaa
gaagagataaatatgattcctccaccaaccccagtgaggactgttatgaataccattcaa
cagttagtgatgattttaaattcagcaagtgatcaaccatcagaaaatctgatttcctat
ttcaataactgcactgtgaatccaaaagaaaatattctgaaaagagtaaaggatgttgga
atcatctttaaggaaaaatttgctaaagctgtgggacagggatgtgttgatattggatca
cagcgatacaaacttggagttcgactgtattaccgagtaatggaatccatgcttaaatca
gaagaggaacgattgtccattcaaaattttagcaaactcttgaatgacaacatctttcat
atgtctttattggcatgtgcccttgaagttgtaatggctacatatagcagaaatacatct
cagaatcttgattctggaacaaatttgtccttcccatggattctgagtgtacttaattta
aaaccttttgatttttacaaagtgattgaaagttttatcaaggcagaagccaacttgaca
agagaaatgataaaacacttggaacgatgtgaacatagaatcatggaatcccttgcatgg
ctctcggattcacctttatttgatcttattaagcagtcaaaagacagagaaggaccagcc
gatcattttgaatcttcttgtcctctcaaccttcctctccagaataatcacactgcagca
gatatgtatctttctcctatgagatccccaaagaaaaaaagctcaaccacacgtgtaaac
tctactgcgaatgtagagccacaagcaacctcagctttccagacccagaagccattgaaa
tctacctccctttcactcttttacaaaaaagtgtaccgactggcctatctccgactcaat
accctatgtgcacgcctcctgtcggaacacccggaactggagcacatcatctggaccctt
ttccaacacactctgcaaaatgaatatgatctcatgagggataggcatttggaccagatc
atgatgtgttccatgtatggtatatgcaaagtgaagaatatagatctgaaattcaaaatc
attgtgacagcatacaaagatcttcctcatgctgttcaggagacattcaaacgtgtttta
ataagagaagaagagtatgactccattatagtattctacaactcggtcttcatgcagaag
ctgaaaacaaatattttgcagtatgcttccaccaggccccctaccttgtcaccaatacct
cacattcctcgaagcccttacaaattttctagttcccccttacggcttcctggggggaat
atctacatatcacctttgaagagtccatataaaatttcagaaggtctgccaacaccaaca
aaaatgacaccaagatcaagaatcttagtttcaattggtgaatcatttgggacttctgaa
aagttccagaaaataaaccagatggtatgtaacagcgaccgggtgctcaaaagaagtgct
gaaggaagcaaccctcctaaacctctgaaaaaattacgtttcgatattgaagggacagat
gaagcagatggaagtaaacatctagcaggggagtcaaaatttcaactgaaactcgcagaa
atgacatctactcgaacacgaatgcaaaagcagaaaatgaatgatagcatggatacctca
aataaggaagaaaagtga
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