Ochotona princeps (American pika): 101518025
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Entry
101518025 CDS
T07609
Name
(RefSeq) RLA class I histocompatibility antigen, alpha chain 11/11-like
KO
K06751
MHC class I antigen
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04144
Endocytosis
opi04145
Phagosome
opi04218
Cellular senescence
opi04514
Cell adhesion molecules
opi04612
Antigen processing and presentation
opi04940
Type I diabetes mellitus
opi05163
Human cytomegalovirus infection
opi05165
Human papillomavirus infection
opi05166
Human T-cell leukemia virus 1 infection
opi05167
Kaposi sarcoma-associated herpesvirus infection
opi05168
Herpes simplex virus 1 infection
opi05169
Epstein-Barr virus infection
opi05170
Human immunodeficiency virus 1 infection
opi05203
Viral carcinogenesis
opi05320
Autoimmune thyroid disease
opi05330
Allograft rejection
opi05332
Graft-versus-host disease
opi05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101518025
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101518025
04145 Phagosome
101518025
09143 Cell growth and death
04218 Cellular senescence
101518025
09150 Organismal Systems
09151 Immune system
04650 Natural killer cell mediated cytotoxicity
101518025
04612 Antigen processing and presentation
101518025
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101518025
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
101518025
05170 Human immunodeficiency virus 1 infection
101518025
05168 Herpes simplex virus 1 infection
101518025
05163 Human cytomegalovirus infection
101518025
05167 Kaposi sarcoma-associated herpesvirus infection
101518025
05169 Epstein-Barr virus infection
101518025
05165 Human papillomavirus infection
101518025
09163 Immune disease
05320 Autoimmune thyroid disease
101518025
05330 Allograft rejection
101518025
05332 Graft-versus-host disease
101518025
09166 Cardiovascular disease
05416 Viral myocarditis
101518025
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
101518025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
opi04147
]
101518025
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
opi00537
]
101518025
Exosome [BR:
opi04147
]
Exosomal proteins
Proteins found in most exosomes
101518025
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
opi00537
]
Antigens
101518025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
C2-set_3
ig
C2-set_2
Motif
Other DBs
NCBI-GeneID:
101518025
NCBI-ProteinID:
XP_012786133
LinkDB
All DBs
Position
12:27934726..27955174
Genome browser
AA seq
328 aa
AA seq
DB search
ILILAALLPIQSQPLSPPGSHSLMYFITAVSRPGLGEPHFIIVGYVDDTQFVRFDSNTTN
PRMEPLEPWALQMEPKYWDRETRFANDMKRIYSAYLKDPLDRFNRSEAGSHTYQVMYGCE
VGQDERFLHGYWQIAYDGADLISLNEDLRSWTAVDTKEAQITKRKLEAAPVAEYYKAYLK
VGCVKNLNTFLKKGNAVLKHRAPLTAHVTHHPVSDQKATLRCWALGFYPKDITLTWRRNG
EDLTQDMELVETRPSGDGTFQKWAAVLVPSGEEQRYTCHVEHEGLPEPLTLRWGPPQPTV
RVWQVRIAVIVGAVFVAVVTAVLMYSGY
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
attctaatcctggcggccctgcttcccatccagtctcagcccctctctcccccaggctcc
cactccctgatgtatttcatcaccgccgtgtcccggcctggcctcggggagccgcatttc
atcatcgtgggctacgtggacgacacgcagttcgtgcgcttcgacagcaacaccacgaac
cctcggatggagccgctggagccgtgggcgctccagatggagccgaagtactgggaccgg
gagactcgctttgccaacgacatgaagcgaatctacagcgcgtacctgaaggacccgctg
gaccgtttcaaccgtagtgaggccgggtctcacacctaccaggtcatgtatggctgcgaa
gtgggacaggatgagcgcttcctccacgggtactggcagattgcctacgatggtgctgac
ctcatctccctcaacgaggacctgcgctcctggaccgcggtggatacaaaggaggctcag
atcaccaagcgcaaactggaggctgcacctgtggctgagtactacaaagcctacctaaag
gtggggtgtgtgaagaatctgaacactttcctgaagaagggcaacgcggtgctgaagcac
agagcccctctcacggctcatgtgacccaccaccccgtctctgaccagaaagccaccctg
aggtgctgggccctgggcttctaccccaaggacatcacactcacctggcgccgaaatggg
gaggacctgacccaggacatggagctggtggagaccaggccttcaggggatggaaccttc
cagaagtgggcagctgtgctggtgccttctggagaggagcagagatacacatgccacgtg
gagcatgaggggctgccagagcccctcaccctgagatgggggcctcctcagcccactgtg
cgtgtatggcaagtcaggattgcagtcattgtgggagctgtgtttgtagctgtggtcact
gctgtgttgatgtactcagggtactag
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