KEGG   Ochotona princeps (American pika): 101519048
Entry
101519048         CDS       T07609                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1 isoform X1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
opi  Ochotona princeps (American pika)
Pathway
opi03420  Nucleotide excision repair
opi04066  HIF-1 signaling pathway
opi04110  Cell cycle
opi04114  Oocyte meiosis
opi04120  Ubiquitin mediated proteolysis
opi04141  Protein processing in endoplasmic reticulum
opi04310  Wnt signaling pathway
opi04350  TGF-beta signaling pathway
opi04710  Circadian rhythm
opi05170  Human immunodeficiency virus 1 infection
opi05200  Pathways in cancer
opi05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:opi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    101519048 (RBX1)
   04120 Ubiquitin mediated proteolysis
    101519048 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101519048 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    101519048 (RBX1)
   04350 TGF-beta signaling pathway
    101519048 (RBX1)
   04066 HIF-1 signaling pathway
    101519048 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    101519048 (RBX1)
   04114 Oocyte meiosis
    101519048 (RBX1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    101519048 (RBX1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101519048 (RBX1)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    101519048 (RBX1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    101519048 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:opi04121]
    101519048 (RBX1)
   03400 DNA repair and recombination proteins [BR:opi03400]
    101519048 (RBX1)
Enzymes [BR:opi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     101519048 (RBX1)
Ubiquitin system [BR:opi04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   101519048 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     101519048 (RBX1)
   Cul2 complex
     101519048 (RBX1)
   Cul3 complex
     101519048 (RBX1)
   Cul4 complex
     101519048 (RBX1)
   Cul7 complex
     101519048 (RBX1)
   Cul8 complex
     101519048 (RBX1)
   Cul9 complex
     101519048 (RBX1)
DNA repair and recombination proteins [BR:opi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      101519048 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      101519048 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 101519048
NCBI-ProteinID: XP_004589534
LinkDB
Position
4:5061234..5078858
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgtggataccccgagcggcaccaacagcggcgcgggcaagaag
cgctttgaagtgaaaaagtggaatgcagtggccctgtgggcctgggatattgtggtggac
aactgtgccatctgcaggaaccacatcatggatctctgcatcgagtgtcaagctaaccag
gcgtctgctacctcggaagagtgcaccgtggcgtggggcgtctgcaatcacgcttttcac
ttccactgcatctctcgctggctcaaaacacggcaggtgtgtcccttggacaacagagag
tgggagttccaaaagtatgggcactag

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