Ochotona princeps (American pika): 101519922
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Entry
101519922 CDS
T07609
Symbol
NOD2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04621
NOD-like receptor signaling pathway
opi04668
TNF signaling pathway
opi05152
Tuberculosis
opi05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
101519922 (NOD2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101519922 (NOD2)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
101519922 (NOD2)
09163 Immune disease
05321 Inflammatory bowel disease
101519922 (NOD2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
opi04054
]
101519922 (NOD2)
Pattern recognition receptors [BR:
opi04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
101519922 (NOD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
CARD
WHD_NOD2
LRR_4
LRR_8
AAA_16
nSTAND_NTPase5
AAA_29
NB-ARC
AAA_25
AAA_22
AAA_30
G-alpha
nSTAND3
ABC_tran
RsgA_GTPase
FtsK_SpoIIIE
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
101519922
NCBI-ProteinID:
XP_004584173
LinkDB
All DBs
Position
5:23002415..23035341
Genome browser
AA seq
981 aa
AA seq
DB search
MCSQEAFQAQRSQLVGLLVSGSLEGFENILDLLLSWEVLSWEDYEGLRLLGQPLSCLARR
LLDTVWNKGTWGCQKLIAAIQEAQDNSRCLELHGCWDPNSLHPAQDLQNHRPAIVRRLYS
HVEGVLDLAREQGFISQYECDEIRLPIFTSSQREAKAAACEKYMSKLRTTVAAQSRFLST
YDGAENLCLEDIYTENTLEVRTEVGTTGCLHNSPAALGLEELFSPHSHLNEDADTVLVVG
EAGSGKSTLLQQLHLLWATGRDFQEFLFVFPFSCRQLQCVARPLSVRTLLFEHCCWPDMG
QQDIFQFLLDHPDRVLLTFDGFDEFRFRFTDRERHCSPTDPTSIQTLLFNLLQGNLLKNA
RKVLTSRPDAVSAFLRKYVRTEFNLKGFSEEGIELYLRKCHREPGVADRLIHLLQTTSAL
HGLCHLPVFSWMVSKCHQELLLRDGGSPKTTTDMYLLILQHFLLHASLPDSASQGLGPSL
LQSRLPTLLHLGRLALWGLGMCCYVFSAQQLQAAQVNPEDISLGFLVQAQSVVPGSTAPL
EFLHITFQCFLAAFYLVLSVDVPSDSLRYLFHCGRPGSSPLARLLPRLCVQGSEPRESTV
AALLQKAEPHNLQITATFLAGLLSREHRGLLAECQASEKALMRRQACARWCLARSLHKHF
QSIPPAVPGEAKSMHAMPGFIWLIRSLYEMQEERLAREAVRGLNVEHLKLTFCNVGPTEC
AALAFVLRHLRRPVALQLDYNSVGDIGVEQLLPCLSACKALYLRDNNISDRGICKLVEHA
LHCEQLQKLALFNNKLTDGCAHSMAQLLACKQNFLALRLGNNHITAEGAQVLAQGLRGNG
SLQFLGFWGNKVGDKGAQALAEALGEHQSLKWLSLVGNNIGSMGAQALASMLEKNVALEE
LCLEDNHIQDAGVCSLAEGLKRNSSLKVLKLSNNCITSVGAEALLQALASNDTILEVWLH
GNTFSAEEMEALAHRDPRLLL
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcacaagaggctttccaggcacagaggagccagctggtgggtctgctggtttca
gggtccctggagggctttgagaacatcctggacttattgctgtcatgggaagttctctcc
tgggaggactatgaaggcctccgcctcctaggccagccattgtcctgtttggccaggcgc
ctcctggacactgtgtggaataagggcacttggggctgtcagaagctcatcgcggctatc
caggaagcccaggacaacagcaggtgcctggaactgcatggctgctgggaccccaactca
ctccacccagcccaggacctgcagaatcaccggccagccatcgtcaggagactctacagc
catgtggaaggcgtgctcgacctggcacgggagcagggcttcatcagccagtacgagtgt
gatgaaatcaggttgcccatcttcacatcatcccagagggaagccaaagctgcggcctgt
gagaagtacatgtccaagctgaggaccactgtggccgcccagtctcgcttcctcagcact
tacgatggagcggagaacctttgcctagaggatatatacacagagaacaccttggaggtg
aggacggaggtgggcacgactggatgcctgcacaacagcccagctgccctgggcctggag
gagctcttcagcccgcacagccacctgaatgaagatgcggacacggtgcttgtggttggt
gaggcaggcagtggtaagagcacgctgctgcagcagctgcacctgctgtgggccacaggg
cgggacttccaggagtttctctttgttttcccgtttagctgccggcagctacagtgtgtg
gccagaccgctgtctgtaaggacgctgctctttgaacactgctgctggcctgatatgggt
cagcaggacatcttccagttcctcctggaccaccctgaccgggtcctgttgacctttgat
ggctttgatgagttcaggttcaggttcacggaccgggaacgtcactgttctcccacggac
cccacatccatccagactctgctcttcaacctgctgcaaggcaacctgctgaagaatgcc
cgcaaggtactgactagccgtccggatgcggtgtcggcgttcctgcgaaagtacgttcgc
accgagttcaacctcaagggcttctcggaagagggcatcgaactgtacctgaggaagtgc
caccgtgagcccggagtggcagatcgcctcatccacttgctccaaacgacttcagccctg
cacggcttgtgccaccttcctgtcttctcgtggatggtgtccaaatgccaccaggaactg
ttgctgcgggatgggggctccccaaagaccaccacagatatgtacctcctaatcctgcag
catttcctgctgcatgcctccctgccggactcggcctcccagggcctgggccccagcctg
cttcaaagcagactccccaccctcctgcaccttggccgcctggctctctggggcctgggc
atgtgctgctatgtattctcagcccagcagctccaggcagcgcaggtcaaccccgaggac
atctctcttggcttcctggtgcaagcccaaagtgttgtgccaggaagtacggcacccctg
gagttcctgcacatcaccttccagtgctttcttgccgcgttctacttggtgctcagtgtt
gacgtgccttcggactcgctcagatacctcttccactgtggcaggcctggcagctcacca
ctggccaggctgctgcccaggctgtgtgtccaaggctcagagcccagggaaagcaccgtg
gcagctttgctgcagaaggccgagccgcacaaccttcaaatcacagccaccttcctggct
ggtctgctttcccgggagcaccggggcctgctggctgagtgtcaggcatccgagaaggcc
ttgatgcggcgccaggcctgtgcccgctggtgtctggcccgcagcctccacaagcacttc
cagtccatcccacccgccgtgccaggagaggctaagagcatgcatgccatgcccggcttc
atctggctcatccggagcctctatgagatgcaggaggagcgactggcccgggaggccgtg
cgtggcctgaacgttgagcacctcaagctgacattttgcaatgtgggccccactgaatgt
gctgcgttggccttcgtgctccggcacctccggcgacctgtggctttgcagctggattac
aactcggtgggcgacatcggtgtggaacagctgctgccatgcctcagtgcctgcaaggcc
ctctacctgcgcgataacaatatctcagaccgaggcatttgcaagcttgtggaacatgct
ctccactgtgagcagttacagaagttggctctgttcaacaacaaattgactgatggctgt
gcccactccatggcccaactccttgcatgcaaacagaacttcctggcgttgaggcttggg
aacaaccacatcaccgccgaaggagcccaggtgctggcccaggggctccggggcaacggt
tccctgcagttcctagggttctggggcaacaaagtgggtgacaaaggggcccaggccctg
gctgaagccctgggtgagcaccaaagcttgaagtggctcagcctggtggggaacaacatt
ggcagcatgggtgcccaagccttagcatcgatgttggaaaagaacgtggcactagaagaa
ctctgcctggaagacaaccatatccaggatgcaggtgtatgctctctcgcggaaggactg
aagagaaattcaagtttgaaagtcctgaagctgtccaacaactgcatcacctccgtgggg
gcggaggccctcctgcaggccttggcaagcaacgacaccatactggaagtctggctccat
gggaacactttctctgcagaggaaatggaggcgctcgcccacagggaccccagactcttg
ctttga
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