Ochotona princeps (American pika): 101520480
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Entry
101520480 CDS
T07609
Symbol
FADS2
Name
(RefSeq) acyl-CoA 6-desaturase
KO
K10226
acyl-CoA 6-desaturase (Delta-6 desaturase) [EC:
1.14.19.3
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi00592
alpha-Linolenic acid metabolism
opi01040
Biosynthesis of unsaturated fatty acids
opi01100
Metabolic pathways
opi01212
Fatty acid metabolism
opi03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
101520480 (FADS2)
01040 Biosynthesis of unsaturated fatty acids
101520480 (FADS2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
101520480 (FADS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
opi01004
]
101520480 (FADS2)
Enzymes [BR:
opi01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.19 With oxidation of a pair of donors resulting in the reduction of O2 to two molecules of water
1.14.19.3 acyl-CoA 6-desaturase
101520480 (FADS2)
Lipid biosynthesis proteins [BR:
opi01004
]
Desaturase
Front-end
101520480 (FADS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FA_desaturase
Cyt-b5
Motif
Other DBs
NCBI-GeneID:
101520480
NCBI-ProteinID:
XP_004599382
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Position
1:105777049..105804202
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AA seq
444 aa
AA seq
DB search
MGKGGNQGEGAPEREATIPTFSWEEIQKHNLRTDKWLVIDRKVYNVTKWSQRHPGGHRVI
GHYAGEDATDAFRAFHPNLDVVGKFLKPLLIGELAPEEPSLDRDKNSQITEDFRTLKKTA
EDMNLFQANHLFFLLLLAHIIVMESIAWFIVFYFGNGWIPTVITAFVLATSQAQAGWLQH
DYGHLSVYKKSTWNHIVHKFIIGHLKGASANWWNHRHFQHHAKPNVFHKDPDVKMLHVFV
LGEWQPVEYGKKKLKYLPYNHQHEYFFLIGPPLLIPMYFQYQIIMTMIVHKHWVDLAWAI
SYYIRFFFTYIPFYGVLGAILFLNFIRFLESHWFVWVTQMNHIVMEIELESYRDWFSSQL
AATCNVEQSFFNDWFTGHLNFQIEHHLFPTMPRHNLHKIAPLVKSLCAKHGIEYQEKPLP
RALLDIIRSLKKSGQLWLDAYLHK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggggggcaaccagggcgagggggcccccgagcgggaggcgaccattcccacc
ttcagctgggaggagattcagaagcacaacttgcgcaccgacaagtggcttgtcatcgac
cgcaaggtctacaacgtcacgaagtggtcccagcggcacccggggggccaccgggtcatc
gggcactacgcgggagaagatgctacggatgctttccgggccttccaccccaacctggat
gttgtgggcaagttcctgaagcccctgttgattggcgagctggccccagaggaacccagt
cttgaccgtgacaagaattctcagatcacggaggacttccgtaccctgaagaagacggct
gaagacatgaacctgttccaggccaaccacctgttcttcctgctcctgctggcccacatc
atcgtcatggagagcatcgcctggttcattgtcttctactttggcaatggctggatcccc
acggtcatcacagcctttgtgctggctacctctcaggcccaggctggatggctccaacat
gactacggccacctttctgtctacaagaagtccacctggaaccacattgtccacaagttc
atcattggccacttgaagggtgcctcggccaactggtggaaccatcgccacttccagcat
cacgccaagcccaacgtcttccacaaggacccggatgtgaagatgctgcatgtgtttgtc
ctgggcgagtggcagcctgtcgagtatggcaagaagaagctcaagtatcttccctacaac
caccagcatgaatacttcttcctgattgggccgccgctgctcatccccatgtacttccag
tatcaaatcatcatgaccatgatcgtccacaaacactgggtggacctggcctgggccatc
agctactacatccggttcttcttcacctacatccctttctacggcgtcctaggagccatc
cttttcctcaacttcatcaggttcctggagagccattggtttgtgtgggtcactcagatg
aaccacatcgtcatggagattgagcttgaatcgtaccgtgactggttcagcagccagctg
gcagccacctgcaacgtggaacaatccttcttcaacgactggttcactgggcacctcaac
tttcagattgagcaccacctctttcccaccatgccccggcataatttgcacaagatcgcc
ccgttggtgaagtccctgtgtgccaagcatggcatcgagtaccaggagaagcccctgccc
agggccttgttggacatcatcaggtccctgaagaaatccgggcagctgtggctggacgcc
tacctccacaaatga
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