Ochotona princeps (American pika): 101521365 Help Entry 101521365         CDS       T07609                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism opi  Ochotona princeps (American pika) Pathway opi04015   Rap1 signaling pathway opi04115   p53 signaling pathway opi04145   Phagosome opi04148   Efferocytosis opi04151   PI3K-Akt signaling pathway opi04350   TGF-beta signaling pathway opi04510   Focal adhesion opi04512   ECM-receptor interaction opi04820   Cytoskeleton in muscle cells opi05144   Malaria opi05165   Human papillomavirus infection opi05205   Proteoglycans in cancer opi05206   MicroRNAs in cancer opi05219   Bladder cancer Brite KEGG Orthology (KO) [BR:opi00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     101521365 (THBS1)    04350 TGF-beta signaling pathway     101521365 (THBS1)    04151 PI3K-Akt signaling pathway     101521365 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     101521365 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     101521365 (THBS1)    04148 Efferocytosis     101521365 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     101521365 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     101521365 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     101521365 (THBS1)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     101521365 (THBS1)    05205 Proteoglycans in cancer     101521365 (THBS1)   09162 Cancer: specific types    05219 Bladder cancer     101521365 (THBS1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     101521365 (THBS1)   09174 Infectious disease: parasitic    05144 Malaria     101521365 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:opi04131]     101521365 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:opi00536]     101521365 (THBS1) Membrane trafficking [BR:opi04131]  Endocytosis   Phagocytosis    Opsonins     101521365 (THBS1) Glycosaminoglycan binding proteins [BR:opi00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101521365 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd TSP1_CFP_C cEGF EGF_3 TSP1_ADAMTS Laminin_G_3 TSP1_CCN Laminin_G_2 EGF Laminin_G_1 Motif Other DBs NCBI-GeneID:  101521365 NCBI-ProteinID:  XP_004578240 LinkDB All DBs Position 17:53210201..53226551 Genome browser AA seq 1168 aa AA seqDB search MGLAWGLGVLFLLQACGTNRIPESGGDNSVFDIFELTGAARRGSGRRLVKGPDPSSPAFR IEDANLIPPVPDDKFQDLVDAVRADKGFLFLASLRQLKKTRGTLLALERKDNSGQIFSVV SNGKAGTLDLSLTVQGKQHVVSVEDALLATGHWKSITLFVQEDRAQLYIDCEKMENAELD VRIQSIFTRDLANVARLRVAKGGVNDNFQGALQNVRFVFGTTPEDILRNKGCSSNSGVLL PFDNNVVNGSSPAIRTDYVGHKTKDAICGISCEELSNIFLELRGLRTIVTTLQDSIRKVT EENKELANELRKPPLCYHNGVQYRNNEEWTVDSCTECRCQNSVTICKKVSCPIMPCSNAT VPDGECCPRCWPSDSADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSVQTRT CHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQLNGKPCEGEARETK ACRKDACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPAPQFGGKDCVGDVTENQICN KQDCPIDGCLSNPCFAGVKCTSYPDGSWKCGTCPPGYSGNGIQCKDVDECKEVPDACFNH NGEHRCRNTDPGYNCLPCPPRYTGTQPFGRGVEHAMANKQVCKPRNPCTDGTHDCNKNAK CNYLGHYSDPMYLCECKPGYAGNGIICGEDTDLDGWPNEDLVCIANATYHCKKDNCPNLP NSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYNHN PDQADTDSNGEGDACAVDIDGDGILNERDNCQYVYNVDQEDTDMDGVGDQCDNCPLEHNP DQLDSDSDLIGDTCDNNQDIDDDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDNDG IPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDTIPDILDICPENVDISETDFRKFQM IPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFAEFNAVDFSGTFFINTERDDDY AGFVFGYQSSSRFYVVMWKQLTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNALWH TGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGYIRVVMYEGKKIMADSGPIYDKT YAGGRLGLFVFSQEMVFFSDMKYECRDS NT seq 3507 nt NT seq  +upstreamnt  +downstreamnt atggggctggcctggggactcggtgtcctgttcctgttgcaagcatgtggcaccaaccgc attccagaatccgggggagacaatagtgtgttcgacatctttgaactcactggggccgcc cgcaggggctctgggcgccgcctagtcaagggccccgacccgtccagtcctgctttccgc attgaagatgccaacctgatccccccggtgcctgatgacaagttccaggatctagtggat gcggtgcgggcagacaaaggtttcctcttcctggcctccctgaggcagctgaagaagacc cgcggcacgctgctggccttggagcgcaaagacaactcgggccagatcttcagcgtggtc tccaacggcaaggcgggcaccctggacctgagcctgaccgtgcaggggaagcagcacgtg gtgtcggtggaagatgctctcctggcgaccggccactggaagagcatcaccctgtttgtg caggaagacagggcccagctgtacatcgactgcgagaagatggagaacgctgagctggat gtccgcatccagagcatcttcaccagggacctggccaacgtcgcccgacttcgcgttgca aagggaggcgtcaatgacaacttccagggggcgctgcagaacgtgaggtttgtctttgga accactccagaagacattctgaggaacaaaggctgctccagcaacagcggtgtccttctc ccctttgataacaatgtggtgaatgggtccagccctgccatccgcactgactacgttggt cacaagacaaaggatgccatctgtggcatctcctgtgaagagctgtccaacatatttctg gaactccggggtctgcgcaccatcgtgaccacgctgcaggacagcatccgcaaagtgact gaagagaacaaagagttggccaacgagctcaggaagcctcctctgtgctatcacaatgga gtccagtacaggaacaacgaggaatggacagttgacagctgcacggagtgtcgctgccag aactcagttactatctgcaaaaaggtctcctgccccatcatgccctgctccaatgccaca gttcctgatggagaatgctgcccacgctgttggcccagcgactcggcagatgatggctgg tctccatggtctgagtggacctcttgctctgtgacatgtggcaatggaattcagcagcgt ggccgctcctgcgacagcctcaacaaccgatgtgagggctcctcagtgcagacccggacc tgccacatccaggagtgtgacaagcgatttaaacaggatggcggctggagccactggtcc ccctggtcctcctgttctgtgacttgcggagatggtgtgatcacaaggatccggctctgc aactctcccagcccccagctgaacgggaaaccatgtgaaggcgaagctcgggagaccaaa gcctgcaggaaagatgcctgccccatcaacggaggctggggcccctggtccccatgggac atctgttctgtcacctgcggaggaggggtgcagaaacgaagccggctctgcaacaaccct gcaccccagtttggaggcaaggactgcgtcggtgatgtgacagaaaaccagatctgcaac aagcaggactgtccaattgatggatgcctgtccaatccctgttttgcgggtgttaagtgt acaagctaccctgatggcagctggaagtgtggcacctgtccccctgggtacagtggaaat ggcatccagtgcaaagatgttgatgagtgcaaagaagtacctgatgcctgcttcaaccat aacggggaacacaggtgcagaaacacagaccccggctataactgcctgccctgccctcca cgctacactggcacacagcctttcggccggggtgttgaacatgccatggctaacaaacag gtatgcaagccccgcaacccctgcacagatgggacccacgattgcaacaagaatgccaag tgcaactacctgggccactacagtgaccccatgtacctgtgtgagtgcaagcctggctat gctggcaatggcatcatctgtggggaggacacagacctcgatggctggccaaatgaggac ctggtgtgcattgcaaatgcaacttaccactgcaaaaaggataactgccccaatctcccc aactcagggcaggaagactatgacaaggatggaatcggtgatgcctgtgatgatgatgat gacaacgacaaaatcccagacgacagggacaactgtccattccattacaacccagcccag tatgactatgatcgtgatgacgtgggcgatcgctgtgacaattgcccctacaaccacaac ccagatcaggcagacacagacagcaatggggaaggagacgcctgtgctgtggacattgac ggagatggtatcctcaatgagcgagacaactgtcagtatgtctacaacgtggaccaggag gacactgatatggatggggttggagaccagtgtgataactgtcccctggaacacaatccc gatcagctggactctgactcggatctcattggagacacctgtgacaacaatcaggatatt gatgacgatggccaccagaacaatctggacaactgcccctatgtgcccaacgccaaccag gctgaccatgataaagatggcaagggggatgcctgtgaccatgatgatgacaatgatggc attcctgatgacagggacaactgcaggcttgtgcccaatcctgaccagaaggactcagat ggtgatggtcgaggtgacgcttgcaaagatgattttgatcatgacacaattccagacatc cttgacatctgccctgagaatgttgatatcagtgaaaccgacttccgcaaattccagatg attcctctagaccccaagggtacatcccaaaatgacccaaattgggttgtacgccatcag ggtaaagaacttgtccagactgtcaactgtgaccctggacttgctgtaggttttgctgag tttaatgctgtggacttcagtggcaccttcttcattaacacggaaagagacgatgactat gctggatttgtgtttggctatcaatctagtagccgcttctacgtggtgatgtggaagcaa ctcactcagtcctactgggacacgaaccctaccagggctcagggatactcaggcctgtct gtgaaggttgtgaactctaccacagggcctggggagcacctgcggaatgccctgtggcac acaggaaacactcctggccaggtgcgtaccctgtggcatgaccctcgtcacattggctgg aaagatttcactgcttacagatggcgtctcagccacaggccaaagacaggttacattaga gtggtaatgtatgaagggaagaaaatcatggctgactcaggacccatctatgacaaaacc tatgctggtggcaggctaggattattcgtcttctcccaagaaatggtgttcttctccgac atgaaatatgaatgtagagattcctaa

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