Ochotona princeps (American pika): 101521444
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Entry
101521444 CDS
T07609
Symbol
PSEN2
Name
(RefSeq) presenilin-2 isoform X1
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04330
Notch signaling pathway
opi04722
Neurotrophin signaling pathway
opi05010
Alzheimer disease
opi05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
101521444 (PSEN2)
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
101521444 (PSEN2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
101521444 (PSEN2)
05022 Pathways of neurodegeneration - multiple diseases
101521444 (PSEN2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
opi01002
]
101521444 (PSEN2)
Peptidases and inhibitors [BR:
opi01002
]
Aspartic peptidases
Family A22: presenilin family
101521444 (PSEN2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Presenilin
PP1_bind
Motif
Other DBs
NCBI-GeneID:
101521444
NCBI-ProteinID:
XP_004578536
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Position
16:complement(55619709..55634062)
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AA seq
448 aa
AA seq
DB search
MLMFMASDSEEEVCDERTSLMSAESPTPRSGQEGRQGPEDGEGAAQWGNQENEEDCEEEP
DQYVCSGTPGRPPGLEEELTLKYGAKHVIMLFVPVTLCMIVVVATIKSVRFYTEKNGQLI
YTPFTEDTPSVGQRLLNSVLNTLIMISVIVVMTIFLVVLYKYRCYKFIHGWLIMSSLMLL
FLFTYIYLGEVLKTYNVAMDYPTLFLTVWNFGAVGMVCIHWKGPLALQQAYLIMISALMA
LVFIKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQERNEPIFPALIYSSAMVW
TVGMAKLDPSSQGALQLPYAPDMEEDPYDSFGEPSYPEVFDPSLPGYPGEELEEEQERGV
KLGLGDFIFYSVLVGKAAATGSGDWNTTLACFVAILIGLCLTLLLLAVFKKALPALPISI
TFGLIFYFSTDNLVRPFMDTLASHQLYI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgctcatgttcatggcctctgatagtgaggaagaagtgtgcgacgagcggacatccctg
atgtcagcggagagccccacgccacgctccggccaggagggcaggcagggcccggaggat
ggagagggtgcagcccagtggggaaaccaggagaacgaggaggactgtgaggaagagcct
gatcagtacgtgtgcagtgggacccccgggcggccaccaggcctggaggaggagctgaca
ctcaaatatggagccaagcacgtgatcatgctgtttgtgccagtcacactgtgcatgatc
gtggtggtagccaccatcaagtctgtgcgcttctacacagagaagaatggacagctcatc
tacacacccttcactgaagacacaccctcagtgggccagcgccttctcaactccgtgctg
aacaccctcatcatgatcagcgtcatcgtggtcatgaccatctttctggtggtactctac
aagtaccgctgctacaagttcatccatggctggctgatcatgtcctccttgatgctgctc
ttcctcttcacctacatctacctcggggaggtgctgaagacctacaacgtggccatggac
tacccgaccctctttctgaccgtctggaacttcggggcagtgggcatggtgtgcatccac
tggaaagggcctctggcactgcagcaggcctacctcatcatgatcagcgcactcatggcc
ttggtgtttatcaagtatctccccgagtggtcggcctgggtcatcctcggcgccatctct
gtgtatgatctcgtggctgtgttgtgtcccaaagggcctctgagaatgctggtggagaca
gcccaggaaaggaacgagcccatatttcctgctctgatctactcatctgccatggtgtgg
acagtgggcatggcaaagctggacccctcttcccagggagccctgcagctcccctacgcc
ccagatatggaagaagacccctatgacagctttggggagccatcgtaccctgaagtcttt
gacccctcactgcctggctaccccggggaggagctggaggaagagcaagaacgaggggtg
aagctcggcctgggagacttcatcttctacagcgtgctcgtgggcaaggcggcagccacc
ggtagcggggactggaacaccacgctggcctgctttgtggccattctcattggtttgtgt
ctgaccctcctgctgctcgccgtgttcaagaaggcgctgccagctctccccatctccatc
acgtttgggctcatcttctatttctccaccgacaacctcgtgcgccctttcatggacacc
ctggcctcccatcagctctacatctga
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