Ochotona princeps (American pika): 101523576
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Entry
101523576 CDS
T07609
Symbol
HACD1
Name
(RefSeq) very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1 isoform X1
KO
K10703
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:
4.2.1.134
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi00062
Fatty acid elongation
opi01040
Biosynthesis of unsaturated fatty acids
opi01100
Metabolic pathways
opi01212
Fatty acid metabolism
Module
opi_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
101523576 (HACD1)
01040 Biosynthesis of unsaturated fatty acids
101523576 (HACD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
opi01004
]
101523576 (HACD1)
Enzymes [BR:
opi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.134 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
101523576 (HACD1)
Lipid biosynthesis proteins [BR:
opi01004
]
Fatty acid synthase
Component type
101523576 (HACD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTPLA
DUF4383
Motif
Other DBs
NCBI-GeneID:
101523576
NCBI-ProteinID:
XP_004578637
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Position
16:complement(36595617..36638285)
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AA seq
288 aa
AA seq
DB search
MGRLTEAATTGGGAAAAHAAGLPPTPLPLSSTSPGCVATMASSEEDGTNGGASEASEEKE
ATGKRRRRGWLATIWLTFYNIAMTAGWLVLAVAMVRFYMEKGTHRGLYKSIQKTLKFFQT
FALLEIVHCLIGIVPTSVLVTGVQVSSRIFMVWLITHSIKPIQNEESVVLFLVSWTVTEI
TRYSFYTFSLLDHLPYFIKWARYNFFIILYPVGVAGELLTIYAALPYVKKTGMYSIRLPN
KYNVSFDYYYFLLITMASYIPLFPQLYFHMLRQRRKVLLGEVIVEKDD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggggcggctgaccgaggcggcgaccacgggcggcggcgctgcagcggcgcacgcggcg
ggcctccctcccactcccctgcccctgtcgtccacgtcccccgggtgcgtggccaccatg
gcgtccagcgaggaggacggcaccaacggcggcgcctcggaggccagcgaggagaaggag
gccacgggcaagaggaggcgccgtggctggttggccaccatctggctcaccttctacaac
atcgccatgaccgcggggtggttggttctggcagttgccatggtacgcttttatatggaa
aaaggaacacacagaggtttatataaaagtatccagaaaacacttaaatttttccagact
tttgccttgcttgagatagtccactgtttaattggaatcgtacccacttctgtgcttgtg
actggggtccaagtgagttcaagaatcttcatggtgtggctcattactcacagtataaaa
ccgatccagaatgaggagagtgtggtgctttttctggtctcgtggactgtgacagagatc
actcgctattccttctacacattcagtctcctcgaccacttgccatacttcattaaatgg
gccagatataatttttttatcatcttatatcctgttggagttgctggtgaacttcttaca
atatatgctgccttgccatatgtgaagaaaacaggaatgtattcaatacgacttcccaac
aaatacaatgtctcttttgattactactattttcttcttataaccatggcttcatatata
ccgctgtttccacaactctactttcatatgttacgacaaagaagaaaggtgcttcttgga
gaggtgattgttgaaaaggatgattaa
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