Ochotona princeps (American pika): 101525176
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Entry
101525176 CDS
T07609
Symbol
LEMD3
Name
(RefSeq) inner nuclear membrane protein Man1
KO
K19410
inner nuclear membrane protein Man1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
101525176 (LEMD3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
opi04812
]
101525176 (LEMD3)
Cytoskeleton proteins [BR:
opi04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
101525176 (LEMD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MSC
LEM
RBM39linker
YGL204C
Motif
Other DBs
NCBI-GeneID:
101525176
NCBI-ProteinID:
XP_004583286
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All DBs
Position
4:23699156..23743343
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AA seq
916 aa
AA seq
DB search
MAAATAASAAASAPQQLSDEELFTQLRRYGLSPGPVTESTRPVYLKKLKKLREEEQQQYR
SGGRGSKTRNSNNNNTAAATVAAAGPGVRPVSGDLSYLRTPGGVGRITASGPESPLAGGP
GGASAAPAVGSKVLLGFSSDESDVEASPRDQAGGGRRDRAALQYRGLRASPAPLGSSELT
TSHPAERRKPHAWWGTRRAAGPEPQSPAGKDGAAEHEDEQQGDHGEEREPEAEEPLWASR
PVNGSRLLPYSCRENYSDSEEEEDEEEEEDDDDDDDVVASARQVLKDDSLSRHRPRRSHG
KALSSLTAKAAGSRLETSALGGGGLAMNDRAAAAGGLDRSRNLAEAAAEPGGGCDAVDSS
PAPRYRVNAKKLTPLLPPPRTDTDPSLDSCTGSLLKSNNHVGGGAFGVDSPKVYSNSLPP
GSASSPLRINHANHTGSNHTYLKNAYSRPKPAEPEEELLQQFKREEVSPTGSFSAHYLSM
FLLTAACLFFLVLGLTYLGMRGTGVSEDGGLGIKNPFGETFGKIEESERNLIMNSLYKLH
DRLAQLAGDHECGSSSQRTLSVQEAAAYLKDLGPEYEDIFNTSLQWILENGKDVGIRCVG
YGPKEELTNITDVQFLQSTRPQMSFWCRFRRAFITVTHRLLLLCFGVAMVGVVLRYMKYR
WTKEEEEARQMYDMVVKIIDVLRSHNEACQENKDLQPYMPIPHVQDSLIQPHDRKKMKKV
WDRAVDFLAANESRVRTETRRIGGADYLVWRWIQPSASCEKILVIPSKVWQGQAFHLDRR
NSPPNSLTPCLKIRNMFDPVMEIGDQWHLAIQEAILEKCSDNEGIVHIAVDKNSREGCVY
VKCLSPEYAGKAFKALHGSWFDGKLVTVKYLRLDRYHHRFPQALTCNTPLKPSNKHMNSM
SHLRLRSGLASSQGSS
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgacggcggcgtcggcagcggcttcggcgcctcagcagctctcggatgag
gagcttttcactcagctgcgccgttacggcctgtctcctggtcccgtgacggagagcacc
cgccccgtctacctcaagaaactgaagaagcttcgagaggaagagcagcagcagtaccgg
tcggggggccgcggcagcaagacgcggaacagtaataacaataacacggcagccgccacg
gtcgcggccgcgggacccggggtccggccggtctcgggcgacctctcctacttgaggacc
cctggaggtgtgggccgaatcacggcttcaggcccggagagccccctggcaggagggccc
gggggcgcgtcggccgcccccgcggtgggcagcaaagtgctgctgggcttcagctcggac
gagtcggacgtggaggccagcccccgggaccaggccggcggcgggaggagggacagggct
gcgctgcagtaccgcgggctccgagcgtcaccggcgcccctgggctccagcgagctgacc
accagccacccggccgagcgcaggaagccccacgcgtggtgggggacccggagggcggcg
ggccccgagccgcagagcccggcgggcaaagatggggccgcggagcacgaggacgagcag
cagggagaccacggggaggagagggagccggaggccgaggagccgctgtgggcgagccgc
cccgtgaacggcagccggcttctgccttacagctgccgggaaaactattcggattcggag
gaggaggaggatgaggaggaggaggaggacgacgacgacgacgacgacgtggtggcctcg
gccagacaggtattgaaggacgactccctgtcccggcatcggcccagacggagccacggc
aaggcgctctcttcgctgactgctaaagccgccggcagccggctggagacttcggccctg
ggagggggaggactggcgatgaatgacagggcggcggccgccggaggtctagacaggagc
cgaaacctcgcagaggcggcggcggagccgggaggagggtgtgatgcggtggattccagc
cccgctccccggtaccgcgtgaacgccaagaagctgacccctctcctgcccccgccacgg
accgacacggacccaagcttggattcgtgcacaggctccctgctgaaaagcaacaatcat
gtcggcggcggggccttcggcgtggactctccaaaggtttattccaacagccttcccccc
ggctcggcctctagcccactcaggatcaaccacgccaatcacacgggctccaatcacacc
tacctgaaaaacgcctacagcaggccgaagcctgctgaacccgaagaggagcttctgcag
cagtttaaacgggaggaggtgtcccccacagggagtttcagtgctcactacttgtccatg
ttcctcctaactgctgcctgcttatttttcctagtgttgggactgacttacctagggatg
agagggacaggagtatccgaggatggaggactcggcataaaaaacccctttggtgaaaca
tttggaaaaatagaagaaagtgaaagaaatcttattatgaactcattgtacaagcttcat
gatcgattggcacagcttgcaggtgatcatgaatgtggcagttctagtcaaagaacactt
tctgtccaagaggcagctgcatatttaaaagatttaggtcctgaatatgaagatatattt
aacacttcgttgcagtggattttagaaaatgggaaagatgttggaataaggtgtgttggt
tatggccccaaggaagaattgacaaatataactgatgtgcagtttttacagtccacaaga
ccacagatgtccttctggtgtcgttttcgacgtgcttttattactgtcactcacagatta
ttgttgttatgctttggtgtagcaatggttggtgttgttctgcgttacatgaaatatcgc
tggacaaaagaagaggaggaagcaaggcaaatgtatgatatggtggtaaagattatagat
gttctgcgaagtcataatgaagcctgccaggaaaataaagatttacaaccttacatgcct
attccacacgtgcaggattctttaatacagcctcatgacaggaaaaaaatgaagaaggtc
tgggacagagctgttgacttccttgctgctaatgagtctcgagttcgaaccgagacgcgg
aggataggtggtgcagattatctggtttggcggtggattcaaccttctgcatcctgtgag
aaaatattagtaataccctctaaagtatggcagggtcaagcatttcatttagatagaaga
aattcaccaccaaatagtttgacaccgtgtttaaagattcgaaatatgtttgatccagtt
atggaaataggggatcagtggcatctggcaattcaagaagcaattctagagaaatgcagt
gataacgagggcattgtgcacatcgcagttgacaaaaactcccgtgagggttgtgtatac
gttaaatgtctgtctccagagtatgctgggaaggcttttaaagcattacacggctcttgg
tttgacgggaagttggttacagtaaaatatttacgactagatagataccaccaccgcttt
ccccaagctcttacttgcaacactcccttgaagccatcaaataaacatatgaactctatg
tctcatcttcgtcttcgcagtggcctagccagttctcaaggaagttcctga
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