Ochotona princeps (American pika): 101525908
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Entry
101525908 CDS
T07609
Symbol
PCDHGC5
Name
(RefSeq) protocadherin gamma-C5
KO
K16497
protocadherin gamma subfamily C
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
opi04515
]
101525908 (PCDHGC5)
Cell adhesion molecules [BR:
opi04515
]
Cadherins
Protocadherins
101525908 (PCDHGC5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_C_2
PepSY
Motif
Other DBs
NCBI-GeneID:
101525908
NCBI-ProteinID:
XP_004586550
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All DBs
Position
3A:complement(30969687..30989908)
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AA seq
945 aa
AA seq
DB search
MGPEPAAPQLTGRWQVLCMLSLCCWGWVSGQLRYSVLEEAEPGTLVGNVAQDLGFKVSDL
LSRRLRLGSEENGRYFSLSLVSGVLAVNQKIDRESLCGAGTSCLLPMQVVTEHPLELIRV
EVEILDLNDNSPSFASPKREMHISESAAPGARFPLDSAQDPDVGTNAVSFYTLSPSSHFS
LNVKTLKDGKLFPELVLEQQLDREAQARHGLVLTAVDGGTPARSGTSLISIIVLDINDNA
PAFQSSVLRVGLPENAPVGTLLLRLNATDPDEGTNGQLAYSFGDHTSEAVRKLFGLDPSS
GAIHVLGPIDFEESSFYEIHARARDQGQPAMEGHCVIQVDVGDANDNAPEVLLASLVNPV
LENTPVGTVVGLFNVRDRDSGRNGEVSLMIPPDLPFQIKPLENHYSLLTSLPLDREATAH
YSIELLASDAGSPPLHTQLIIRLNISDVNDNAPRFAQQLYTAYIPENRPPGSLLCTVAAS
DPDAGENARLTYSILGTQIQGAPASSFVYVNPEDGRVFAQRTFDYELLQMLQIMVGVRDM
GSPPLSANASLHLFVLDQNDNAPTVLHPRPGREPSAPLRIPRSAPAGSLVTKVTAVDADA
GHNAWLSYSLLPQSTAPGLFLVSAHTGEVRTSRTLLEDDANTQQVVVLVRDNGDPALSST
ATVLLLLEDEEPEETPKSGDFLTHTPERSDLTLYLIVALAAISLMSLVTFSFLSAKCLRG
QAHGDGGGGSCCGQQASTSGEFYTQSSPNLQVSSDGTLKYMEVTLRPTDSQSHCYRTCFS
PASNGSDFTFLRPLSVQQPSALALEPEAFRSRANTLQELSQQAPPNTDWRFSQAQRPGTS
GSQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQH
VPDYRQNVYIPGSNATLTNAGGKRDGKAPAGGNGNKKKSGKKEKK
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggggcctgagccggcagcgccacagctcaccgggagatggcaagtgctgtgcatgttg
tccttgtgttgctggggctgggtgtctgggcagctccggtactcagtgctcgaggaggct
gagccaggaacgctggtggggaatgttgctcaggatttgggcttcaaggtgtccgatctg
ttgagccgccgcctgcggctgggctctgaagagaatgggcgttatttctccctgagtttg
gtgagtggggttctggcagtgaaccagaagattgaccgggagagcttgtgtggagccggc
accagctgcctgctgccaatgcaggtggtgacagagcacccccttgagctgattcgggtg
gaggtggagatcctggatctcaatgacaactcccccagctttgccagccccaagcgggag
atgcacatctctgagtcggccgcacctggggcccggttcccgctggacagtgcccaggat
ccagatgtgggtaccaacgctgtgagcttttacaccctcagccctagcagccacttctct
ctgaatgtaaagaccctcaaagatgggaagctgttcccagagctggtgctggagcagcag
ctggatcgggaagctcaggcgaggcatgggctagtgctcacagctgtggatgggggaacc
ccagcccgctcagggaccagcctcatctccatcatcgtgctggacatcaacgacaatgcc
ccagccttccagtcctcagtcttacgtgtgggacttccagagaatgcacctgtgggcaca
ctgctgctccgcctcaatgccactgacccagacgagggcaccaatgggcagctagcctat
tcttttggagaccacacgtcagaggccgtgcggaaactctttggcctggatcccagcagt
ggagcaatccatgtgttgggtcccatagactttgaggagtcgagtttctatgaaatccat
gctcgggcccgtgaccaggggcaaccggccatggagggccattgtgtgattcaagtagat
gtgggggatgccaatgataatgccccagaggtgctgctggcctctttggtcaaccccgta
ctggagaacaccccagtgggcaccgtggtgggattgtttaatgtgcgggaccgggactca
ggcagaaatggtgaggtgagcctcatgatccctccagacctgccatttcagattaagcct
ttagaaaaccactattctctgctgaccagccttccgttggaccgcgaggccacagcccac
tacagcattgagctgctggccagcgatgctggctcaccgcctctacacacacagctcatc
atcaggctcaacatttccgacgtgaacgacaatgcaccccgctttgcccagcagctctac
actgcctacattcctgaaaaccggcccccgggttccctcctctgcaccgtggctgcttcc
gatccagatgctggggagaacgcccggctcacctactccattttagggacacagattcag
ggagccccggcatcgtctttcgtgtacgtcaatccagaggatgggcgagtctttgcccag
agaaccttcgactatgaattgctgcagatgctccagatcatggttggggttcgagacatg
ggctctcccccattatctgccaacgcatccctgcacctgtttgtcctggaccagaatgac
aatgccccaacagtgctgcacccccggcctggtcgggaaccctcagcccccctgcggatc
ccacgctctgccccagccggctccctggtcaccaaggtgacggccgtggatgctgatgca
ggccacaatgcctggctgtcttattccctgttgccccagtccacagctccggggttgttc
cttgtgtctgcacacacgggtgaggtgcgcaccagcagaacattactggaggatgatgct
aacacgcagcaggtggtggtcctggtgagggacaacggggaccccgcgttgtcctccacg
gccacggtgctgctcctactagaagatgaggagcccgaggagacccccaaatccggtgac
ttcctcacacacactcctgagcgctcggacctgaccctctacctcatcgtggccctcgcg
gccatcagcctcatgtccttggtcaccttcagctttctgtctgccaagtgcctgcggggg
caggcccacggggatgggggtgggggctcgtgctgtggccagcaggcctccacctcgggg
gagttctatacgcagtcgagtcccaacctgcaggtgagctcggacggcacgctcaagtac
atggaggtgacactgcggcccacagactcgcagagccactgctaccgcacgtgcttttca
ccggcctccaacggcagcgacttcactttcctaaggccgctcagcgtgcagcagccctcc
gcgctggcgctggagcccgaggccttccggtcccgtgctaacacactgcaggagctgagc
cagcaagctccgcccaacacggactggcgcttctcacaggcccagagacccggcaccagc
ggttcccaaaatggcgatgaaaccggcacctggcccaacaaccagtttgacacggagatg
ctgcaggccatgatcctggcctctgccagcgaagccgctgatgggagctccaccctggga
ggaggcgctggcaccatgggtctgagtgcgcgctatgggccccagttcaccctgcagcac
gtgcctgactaccgccagaatgtctacatccccggcagcaacgccaccctgaccaacgct
ggcggcaagagggatggcaaggctcccgcagggggcaacggcaacaagaagaagtcgggc
aagaaggagaagaagtaa
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