Ochotona princeps (American pika): 101527019
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Entry
101527019 CDS
T07609
Symbol
ARHGEF1
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04270
Vascular smooth muscle contraction
opi04611
Platelet activation
opi04810
Regulation of actin cytoskeleton
opi04928
Parathyroid hormone synthesis, secretion and action
opi05135
Yersinia infection
opi05163
Human cytomegalovirus infection
opi05200
Pathways in cancer
opi05205
Proteoglycans in cancer
opi05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101527019 (ARHGEF1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
101527019 (ARHGEF1)
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
101527019 (ARHGEF1)
09153 Circulatory system
04270 Vascular smooth muscle contraction
101527019 (ARHGEF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101527019 (ARHGEF1)
05205 Proteoglycans in cancer
101527019 (ARHGEF1)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
101527019 (ARHGEF1)
09171 Infectious disease: bacterial
05135 Yersinia infection
101527019 (ARHGEF1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
101527019 (ARHGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101527019 (ARHGEF1)
Membrane trafficking [BR:
opi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101527019 (ARHGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
101527019
NCBI-ProteinID:
XP_012786045
LinkDB
All DBs
Position
5:5701760..5713147
Genome browser
AA seq
1025 aa
AA seq
DB search
MISEDMAEVEEMEKRGKTEDRFEGDGRDSTPYPFPFPPNSSAAPMELEDVARAAAPGPPR
PGLVPISIIGAEDEDFENELETNAEEHNSQFQSLEQVKQRPAHLMALLQHVALQFEPGPL
LCCLHADMLGALGPKEAKKAFLDFCHSFLDKTAALRVQVPPHVAFELDRTRPDLLSEDVQ
RRFVQEVVQSQQAAVSRQLEDFRSKRLMGMTPWEQELGQLEAWVGRDRTNYVARERHVAE
RLLAHLEEMQHTISMDEERSTAVVGAISLYMRHLGVRTKSGDKKSGRNFFRKKMMGNRRS
DEPPKTKKGLSSILDAARWNRGEPQAPDLRHSKGEVDGEKPGPMDRKGGLGVPSRDRSAG
TSNQDTLGVPLHPISGDSPDREPGVDSPQDVSDLPQQGLALEPLAPLDSTEEGADTERRW
KRLSGRLGRSESLRVSDRRRPSRGSLGAKGRGGGRSRSDVDMDPSSAAAVLGPARRATPE
PGEEGEPGRSGLELEPEEPPGWRELVPPDTLHSLPKSQVKRQEVISELLVTEAAHVRMLR
VLHDLFYQPMAEGGFFPLEELQNIFPSLDELIDVHSLFLDRLMKRRQESGYLIEEIGDVL
LARFDGTEGSWFQKISSRFCSRQSFALEQLKAKQRKEPRFCAFVQEAESQPRCRRLQLKD
MIPTEMQRLTKYPLLLQSIGQNTEEPAEREKVEKAAECCREILHHVNQAVREMEDLLRLK
DYQRRLDLSHLRQSSDPMLSEFKNLDITKKRLVHEGPLVWRVTKDKAVEVHVLLLDDLLL
LLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATDHKAFYVIFTWDQEAQ
IYELVAQTVSERKNWCTLITETAGCLKVPAPASRPKPRPSPSSTREPPLNSSENGNSGGE
IPAIDARTERLLSDLLPFSRPGREGQLAAMALQKVHSLKQLLCPVEEESGAGPPQEEDGV
PGGGPLSPAQMQDIQEKLLSLEESIRQLEELEEEVCRLRPLLSQLGGTMSPNLAAHEDPA
QTGEG
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgatatcagaggacatggccgaggttgaagaaatggagaaaagaggcaagactgaagac
agatttgagggtgatggcagggacagcaccccctacccgttccccttcccccccaacagc
tctgcggcgcccatggagctggaggacgtggcccgggcagcggccccggggcccccccgg
cctggtctggtgcccatcagcatcatcggggctgaggacgaggactttgagaatgaacta
gagacgaacgcagaggagcacaacagccagttccagagcctggagcaggtgaagcagcgc
ccggcccacctgatggcgctcctgcagcacgtggccctgcagttcgagccgggacccctg
ctctgctgcctgcacgctgacatgctgggcgccctgggacccaaagaggccaagaaggcc
ttcctggacttctgccacagcttcctggacaagactgcggccctacgggtacaggtccct
ccccacgtggcttttgaacttgaccgcacgcggcctgatctcctctccgaagatgtccaa
cggcggttcgtgcaggaggtggtgcagagccagcaggcagcagtgagccggcagctggag
gacttccgctccaagcggctcatgggcatgacgccgtgggaacaggagctgggccagctg
gaggcctgggtggggcgggaccgcaccaactacgtggcccgggagcggcacgtggctgag
cggctgctggcccacctggaggagatgcagcacaccatctccatggatgaggagcgcagc
actgctgtggtgggcgccatcagcctgtacatgcgccaccttggggtgagaaccaagagc
ggggacaagaagtcggggaggaacttcttccggaaaaagatgatggggaaccggaggtcc
gatgagccccccaagaccaagaaagggctgagcagcatcctggacgctgcccgttggaac
cggggtgaaccccaggccccagacttgcgacattccaaaggcgaggtggacggggagaag
ccaggccccatggatcggaagggaggcctaggggtgccctctcgggaccgcagtgctggg
acttccaaccaggacacccttggagtccctctgcaccccatctctggggacagcccggac
cgcgagccaggtgtcgacagcccccaagatgtgagcgaccttccccagcagggcctagca
ctggagcccctagcacccctggacagcacggaagagggtgctgacacggagagaaggtgg
aagaggctgtcggggcgtctggggcgctcagagagcctgcgggtgagtgaccgccgccgg
ccttcccggggcagcctcggggctaagggccggggtgggggccgttcccggagcgacgtg
gacatggaccccagctctgccgcggccgtgctaggccctgcccgacgagccacccctgag
cctggcgaagaaggcgagccgggacggtcaggactggagctggaaccggaagagccccct
ggctggcgcgagcttgtgcccccggacaccctgcacagcctgcccaagagccaggtgaag
cggcaggaggtcatcagtgagctgctggtgaccgaggcggcccacgtgcgcatgctgcgg
gtgctccatgacctcttctaccagcccatggccgaggggggcttcttcccgctggaggag
ctgcagaacatcttccccagcctggacgagctcatcgatgtgcactctctgttcctggat
cgtcttatgaagcggaggcaagagagtggctacctcattgaggagatcggagatgtgttg
ctagcccggttcgatggtacggagggctcctggttccagaagatctcctcccgcttctgc
agccgccagtcatttgccttagagcaactcaaagccaaacagcgcaaggagcctcgcttt
tgtgcctttgtgcaggaagccgaaagccaaccgcggtgccggcgcctgcagctgaaggac
atgatccccaccgagatgcaacggctgaccaagtatcccctgctgctgcagagcatcggg
cagaacacagaagaacccgctgaacgggagaaggtggagaaggcggctgagtgctgccgc
gagattctccaccatgtcaaccaagccgtgcgcgaaatggaggacctgctgcgactcaag
gattaccagcggcgtttggatttgtcccacctgaggcagagcagcgaccccatgctgagc
gagttcaagaacctggacatcaccaagaagaggctggtgcatgaggggcccctggtatgg
cgggtgacaaaggataaggccgtagaggtgcatgtgctgctgctggacgacctgctgctg
ctgctgcagcgccaggatgagcggctgctgctcaaatctcacagccggacgctcacgccc
acacctgacggcaagaccatgctgcggccagtgctacggcttacctccgccatgacccgc
gaggtggccaccgaccacaaagccttctacgtcatttttacctgggaccaggaggcacaa
atatatgagctggtggcacagaccgtatcagaacggaagaactggtgcaccctcatcacg
gagaccgccggctgcctgaaggtccctgcccccgcttctcgtcccaagccccgacctagt
ccaagcagcacccgagagcccccgctcaatagctccgagaatggcaacagtggcggagaa
atcccagccatagatgccaggactgagagactcctcagcgacctcctgcccttcagccga
cccggccgtgagggccagctcgctgccatggccctccagaaagtgcattccctgaagcaa
ctgctgtgtcccgtggaggaagagagtggagcggggcctccccaggaagaggatggggtt
ccaggaggtggccccctgagcccagcacagatgcaggatatccaagagaagctgcttagc
ctggaggagagcatccggcagctggaggaattggaggaggaggtatgccgcctgcgaccc
ctcctgtctcagttggggggcaccatgtcccccaacctggctgcacatgaggaccctgcc
cagacaggtgaggggtag
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