Ochotona princeps (American pika): 101527371
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Entry
101527371 CDS
T07609
Symbol
RNF123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123 isoform X2
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101527371 (RNF123)
Enzymes [BR:
opi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101527371 (RNF123)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101527371 (RNF123)
Multi subunit type E3
KPC complex
101527371 (RNF123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_RNF123
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
101527371
NCBI-ProteinID:
XP_004581525
LinkDB
All DBs
Position
9A:17892354..17916412
Genome browser
AA seq
1314 aa
AA seq
DB search
MASKGAGVSLSRKSYRLTSDAEKSKVTGIVDEKLLNDYLHRVFVSPDQSASTATSRKPLN
FQNLPEHLDKLLQVDNEDEESQGQVEGRLGPSTVVLDHTGGFEGLLLVDDDLLGVIGHSN
FGTIRSTTCVYKGKWVYEVLISSQGLMQIGWCTISCRFNQEEGVGDTQNSYAYDGNRVRK
WNVTTTNYGKAWAAGDIVSCLIDLDEGTLSFCLNGVSLGTAFENLSRGVGMAYFPAISLS
FKESVGFNFGSRPLRYPVAGYRPLQDPPGADLTRAQRLLGCFQAVLSVELDPVEGRLVEK
ESSEWQVQGQPTVLLTLAHIFHRLAPLLHQVYLVEAVLMSFLLGIVEKGTPEKAQAMVHQ
VMDLLWLFMEDYEVQDCLKQLMMSLLRLYRFSPIVPDLGLQIHYLQLTIAILRHQKSRKF
LLSNILFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPHRSSREGKDGAEDREECAEER
PRRRAYERGCQRLKKRIEVVEALQVQILKLLLDNKDENGGEASRYIFLTKFRKFLQENAS
GRGNMPMLCPPEYMVCFLHRLISALRYYWDEYKVSNPRASFSEEAYIPPQVFYNGKVDYF
DLQRLGGLLSHLRKTLKDDLASKANIVIDPLELQAATMDDLDEDEEPAPAAAQRPMQALA
VGGALPLPRPGWLSSPTLGRANRFLSTAAVSLMTPRRPLSTAEKVKVRTLNVEQRTREDI
EGSHWNEGLLLGRPPEEPEQPLTENSLLEVLDGAIMMYNLSVHQQLGKMVGVSDDVNEYA
MALRDTEDKIRRCPKRRKDILAELTKSQKVFSEKLDHLSRRLAWVHATVYSQEKMLDIYW
LLRVCLCTIEHGDRTGSLFAFMPEFYLSVAINSYSALKNYFGPVHSMEELPGYEETLTRL
AAILAKHFADPRIVGTDIRDALMQALASYVCYPHSLRAVERIPEEQRIAMVRSLLAPYEQ
RPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSTLLQQHMADLLR
QGPDVAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSVS
LLRVLEMTITLVPEIFLDWARPTSEMLLRRLAQLLNQVLNRVTAERNLFDRVVTLRLPGL
ESVDHYPILVAVTGILVRLLVHGPTAEKERATAVLLADPCFQLRSICYLLGQPEPPAPGA
ALPAPDRKRFSLQSYADYISTEELAQVEQMLAHLTSASAQAAAASLPTSEEDLCPICYAH
PISAVFQPCGHKSCKACINQHLMNNKDCFFCKATIVAVEDWDKAASAGSTSSAA
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaagggggccggtgtgtctttgtcccgcaagagctacaggctgacgtcagat
gccgagaagtccaaggtcacaggcattgtggatgagaagctgctgaatgactacttgcac
cgcgtctttgtttctcctgaccagtccgcctccacagccaccagcaggaaacccctgaac
ttccagaaccttccagagcacctggacaagctgctgcaggtggacaatgaggatgaagag
agccaggggcaggttgaagggcggcttggcccatccactgtggtcctggaccacacgggc
ggctttgaagggctcctcctcgtggatgatgacctcctgggggtgattgggcatagcaac
ttcggcaccatccgctctaccacgtgtgtgtacaaagggaagtgggtctacgaggtgctc
atctcctcgcagggactcatgcagatcggctggtgcaccatcagctgccgcttcaaccag
gaggaaggagtgggtgacacacagaactcctacgcctatgatggcaaccgggtgcgcaag
tggaatgtgactaccacaaattatggcaaggcgtgggcagcgggggacatcgtcagctgt
ctgatcgacctggatgaaggcaccctgtccttctgcctgaatggtgtgtcgctgggcacc
gcctttgagaacctgtccaggggtgtgggcatggcctacttccccgccatcagcctctct
ttcaaggagtccgtgggtttcaactttggcagccgtcctctacgctaccccgtggcgggc
taccggcccctgcaggacccgccgggtgctgacctgacacgggcgcagaggttgctgggc
tgcttccaggccgtgcttagcgtggagctggaccctgtggaagggcgactagtggagaag
gagagctcagagtggcaggtgcagggccagcccaccgtcctcctcacactggcccatatc
ttccatcgcttggctccgctcctgcaccaggtgtacttggttgaggctgtgctcatgagc
ttcctgctgggcattgtggagaagggcacacccgagaaagcgcaggccatggtgcaccag
gtcatggacctcctgtggctcttcatggaggactacgaggtgcaggattgcctcaagcag
ttgatgatgtctctactgcggctgtaccggttctcgcccattgtcccggaccttggcctg
cagatccattacctgcaactcaccattgccatcctgaggcatcagaagtcccgcaagttt
ctgctcagcaacatcctcttcgatgtgctgcgctcggtcgtcttcttctacatcaagagc
cccctgcgtgtggaggaggccggtctgcaggagctcatccccactacctggtggccccac
cgctccagccgggagggcaaagatggtgcagaggaccgggaagagtgtgctgaggagcgg
ccccggcggcgggcctatgaacggggctgccagcggctcaagaagcgcattgaagtggtg
gaagcactgcaggtccagatcctgaagctgctattggacaacaaggatgaaaacgggggg
gaagcttctaggtacattttcttgaccaagtttcgaaagtttctgcaagaaaacgccagc
ggccgtgggaacatgcccatgctctgcccccctgagtacatggtctgcttcttgcaccgg
ctgatctccgccctacgctactattgggatgaatacaaggtctccaatccccgcgcctcc
ttcagcgaggaggcctacatcccaccccaggtcttctataatggcaaagtggactacttc
gacctgcagcgccttggaggcctgctctcccatcttcggaagacactcaaagatgacctt
gcttccaaggccaacatcgtgatcgacccgctagagctccaggcagccaccatggatgac
ctagacgaggatgaggagccagcgcctgctgccgcccagcgccccatgcaggccctggcc
gtggggggcgccttgcccctgcctcggcctggttggctcagttcgcccacgctgggccga
gccaaccgcttcctcagcacggcagccgtgagcctcatgaccccgcgacggccgctgagc
accgcggagaaggtgaaggtccgcacactgaacgtggagcagaggacgcgagaggacatc
gagggcagccactggaacgagggcttactgctgggccggccgcctgaggagcctgagcag
ccgctcactgagaactcgctgctagaagtgttggatggggccatcatgatgtacaacctc
agcgtgcaccagcagttgggcaagatggtgggtgtgtctgatgatgtcaacgagtatgcc
atggccctgagggacacggaggacaagatccgccggtgccccaagcggaggaaagatatc
cttgcagaactgaccaagagccaaaaagtgttctcagaaaagctcgaccacctgagccgc
cgtctagcctgggtccacgctactgtctactctcaggagaagatgttggacatctactgg
ctgttgcgtgtttgcctgtgcaccattgagcacggcgatcgtacgggttcgctcttcgcc
ttcatgcccgagttctacctgagcgtggccatcaacagctacagcgctctcaagaattac
tttggccccgtgcacagcatggaggagctcccaggctacgaagaaacccttacccgcctg
gctgccatcctggccaagcactttgctgacccgcgcattgtgggcactgacatccgcgat
gcgttgatgcaggccctggccagctacgtgtgctacccacactccctgcgagcggtggag
cggatccccgaggagcagcgtatcgccatggtgaggagcctcctggccccttatgagcag
cggccctgggcacagaccaactggatcctggtgcggctttggaggggctgtggattcggg
taccgctacacccggctgccacacctgctgaagaccaagcctgaggatgccaacttgccc
agccttcagaagccctgcccctctaccctgctgcagcagcacatggccgacctgctgcga
cagggtcccgacgtagcacccagcttcctcaacagcgtcttgaaccaactgaactgggcc
ttctctgagttcatcggcatgatccaagagatccagcaggcggccgagcgcttggagcgt
aacttcgtggacagccggcagctcaaggtctgtgccacctgctttgacctctcagtcagc
ctgctgcgggttctggagatgaccatcacgctcgtgcccgagatcttccttgattgggcc
cggcctacctcggagatgctgctgcggcgcctggcccagctgctaaaccaggtgttgaac
cgagtgacagctgagaggaacctgtttgaccgtgtggtcaccctgcggctgcctggcctg
gagagcgtggaccactaccccattctggtggcagtgacgggcattctggtgcggctcctg
gtgcatggtcccaccgcagagaaggagcgagccaccgccgtgctcctggctgacccctgc
ttccagctccgctccatctgctatctcctggggcagccagagccccctgcgcctggtgca
gccctgcctgcccctgaccggaagcgtttctccctgcagagctatgcggattacatcagc
accgaggaactggcccaggtggagcagatgctggcgcacttgacctcggcatccgcccag
gccgcagctgcatccctgcccaccagtgaggaagacctgtgccccatctgctacgcccac
cccatctctgctgtcttccagccgtgtggccacaaatcctgcaaagcctgcatcaaccag
cacctcatgaacaacaaggactgcttcttctgcaaggccaccattgtggctgtggaggac
tgggacaaggcagccagtgccggcagcacctcctcagctgcctag
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