Ochotona princeps (American pika): 101531686
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Entry
101531686 CDS
T07609
Symbol
TRPC3
Name
(RefSeq) short transient receptor potential channel 3 isoform X3
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04360
Axon guidance
opi05017
Spinocerebellar ataxia
opi05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101531686 (TRPC3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
101531686 (TRPC3)
05022 Pathways of neurodegeneration - multiple diseases
101531686 (TRPC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
opi04040
]
101531686 (TRPC3)
Ion channels [BR:
opi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101531686 (TRPC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
101531686
NCBI-ProteinID:
XP_004594598
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All DBs
Position
15:29722197..29817787
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AA seq
928 aa
AA seq
DB search
MLFAREQDLLCQRATECCQGAKLPMGSNRSEFPESFAREPVCPAATVSAVGPAFIGTPCV
GGSSVPQYPTAVLSSPLPRSMEGSPSLRRMTVMREKGRRQAVRGPAFMFNDRGTSLTAEE
ERFLDAAEYGNIPVVRKMLEESTTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLA
RIGDALLLAISKGYVRIVEAILNHPGFAASKRLTLSPCEQELQDDDFYAYDEDGTRFSPD
ITPIILAAHCQKYEVVHMLLLKGARIERPHDYFCKCGDCTEKQRHDSFSHSRSRINAYKG
LASPAYLSLSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDS
EEVEAILNGDLESAEPLEVHRHKASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSG
LREQTVAIKCLVVLVVALGLPFLAIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFLGLL
VFNASDRFEGITTLPNITVIDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEG
PREYILQLWNVLDFGMLSIFIAAFTARFLAFLQATKAQQYVDSYVQESDLSEVTLPPEIQ
YFTYARDKWLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKF
MVLFIMVFLAFMIGMFILYSYYLGAKVNPAFTTVEESFKTLFWSIFGLSEVTSVVLKYDH
KFIENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDG
KTLPPPFSLVPSPKSFVYFFMKIINFSKCRRRRLQKDLEMGMGNSKSRLNLFTQSNSRVF
ESHSFNSILNQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLE
DKSQATEELAILIHKLSEKLNPSVLRCE
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttgctagagagcaggatcttttgtgccaacgggctaccgaatgctgtcagggt
gccaagctgccaatgggtagcaacaggagtgaatttcctgagtcctttgcacgtgagcca
gtttgcccagcagccacggtgtctgcagttggtcctgctttcatagggaccccttgtgtg
ggaggaagcagtgtgccccaatatcctacagctgttttatcatcaccgctgcctaggtcc
atggagggaagcccgtccttaagacgtatgacggtgatgcgggagaagggccggcgccag
gccgtgaggggaccggccttcatgttcaatgaccgaggcaccagcctcaccgctgaggag
gagcgcttcctggatgcggccgagtatggcaacatccccgtagtgcgcaagatgctagaa
gagtctaccacgctgaacgtcaactgcgtggactacatgggccagaacgcactgcagctg
gcagtgggcaatgagcacctggaggtgaccgagctgctactcaaaaaggagaacctggcg
cgcatcggcgacgccctgctgctcgcaatcagcaagggctacgtgcgcatcgtggaggcc
atcctcaaccacccgggcttcgcggccagcaaacgcctgaccctgagcccgtgcgagcag
gagctgcaggacgacgacttctacgcctacgacgaggacggcacacgcttctcgcccgac
atcacccccatcatcctggcggctcactgccagaagtacgaggtggtgcacatgctgctg
ctcaagggcgccaggatcgagcggcctcatgattacttctgcaagtgtggggactgcacc
gagaagcagaggcacgactccttcagccactcgcgctccaggatcaacgcctacaagggg
ctggccagcccggcgtacctgtccttgtccagcgaggacccggtgcttactgccctggag
ctcagcaacgagctggccaaactagccaacatcgagaaggaattcaagaatgactaccgg
aagctctccatgcaatgcaaagactttgtagtgggcgtgctggatctctgccgagactca
gaggaggtcgaagccattctgaacggagatctggagtcagcagagcctctggaggttcac
aggcataaagcttcactgagtcgtgtcaaacttgccattaagtacgaagtcaaaaagttt
gtggctcaccccaactgccagcagcagcttctgaccatctggtatgagaatctctcgggt
ctgcgggaacagactgtggccatcaagtgtctggttgtgctagttgtggccttgggtctc
ccattcctcgccattggctactggatcgcaccttgcagcaggctggggaaaattctgcga
agcccttttatgaagtttgtggcacatgctgcttctttcatcatcttccttggcctgctt
gtgttcaatgcctccgacaggtttgaaggcatcaccacactgccaaatatcacagtcatt
gactatcccaagcagatcttcagggtgaaaaccacccagttcacatggactgaaatgctc
attatggtctgggttctcggaatgatgtggtctgagtgcaaggagctgtggctggaaggg
cctcgggaatacatcttgcagctgtggaacgtgcttgactttgggatgctctctatcttc
attgctgcattcacggccagatttctggctttcctgcaggcaaccaaagcacagcagtat
gtggacagctatgtccaggagagtgacctcagtgaagttaccctccctccagagattcag
tacttcacctatgctagagataagtggctcccttctgaccctcagatcatatcggaaggc
ctttacgccatagcagttgtgctcagcttctctcggatcgcttacatcctgcctgcaaac
gagagctttggccccttacagatctcacttggaaggactgtaaaggacattttcaagttc
atggtcctttttattatggtgtttctggcctttatgattggcatgttcatactttactct
tactatcttggggctaaagtaaatcctgcttttaccactgtagaagaaagtttcaagact
ttgttttggtcaatatttgggttgtctgaagtgacttctgttgtgctcaaatatgatcac
aaattcatagagaatattggatatgttctgtatggaatatacaatgtgactatggtggtg
gttttactcaatatgctaattgcaatgattaacagctcctatcaagaaattgaagatgac
agcgatgtggagtggaagtttgcccgttccaaactttggttgtcctatttcgatgatggg
aaaaccttacctccacccttcagcctagttcctagtccaaagtcgtttgtttatttcttc
atgaagatcattaacttttctaaatgcagaaggagaaggctacagaaggatctagaaatg
ggaatgggtaactcgaagtccaggttaaacctcttcactcagtctaactcaagagttttt
gaatcacacagttttaacagcattctcaatcagccaacacgttatcagcagataatgaaa
agacttataaagcgatatgttttgaaagcacaagtagataaagaaaatgatgaagttaat
gaaggtgaattgaaggagatcaagcaagatatctccagccttcgttatgaacttttggaa
gacaagagccaagcaactgaggaattagccattctgattcataaactcagtgagaaactg
aaccccagcgtgttgagatgtgaatga
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